Detailed information of Bpl_scaf_6533-0.14 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_6533-0.145'->3' EXORIBONUCLEASEBpl_scaf_65332871892845-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03159XRN_NXRN 5'-3' exonuclease N-terminusFamilyInterproscan
PF17846XRN_MXrn1 helical domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR004859DomainXrn1, N-terminalInterproscan
IPR017151Family5'-3' exoribonuclease type 2Interproscan
IPR027073Family5'-3' exoribonucleaseInterproscan
IPR041412DomainXrn1, helical domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR123415'->3' EXORIBONUCLEASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004527Molecular Functionexonuclease activityInterproscan
GO:0004534Molecular Function5'-3' RNA exonuclease activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006139Biological Processnucleobase-containing compound metabolic processInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12619XRN2, RAT1; 5'-3' exoribonuclease 2EC:3.1.13.-
Ribosome biogenesis in eukaryotes ko03008PMID: 28812709
RNA degradation ko03018PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_6533-0.14 global RNA-seq network
TOP