Detailed information of Bpl_scaf_65221-4.5 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_65221-4.5ELONGATION FACTOR TU-RELATEDBpl_scaf_65221439510452048+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00009GTP_EFTUElongation factor Tu GTP binding domainDomainInterproscan
PF03144GTP_EFTU_D2Elongation factor Tu domain 2DomainInterproscan
PF21131eEFSec_4theEFSec C-terminal RIFT domainDomainInterproscan
PF21208euk_SelB_IIISelenocysteine-specific elongation factor, eukaryotes, 3rd domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000795DomainTranslational (tr)-type GTP-binding domainInterproscan
IPR004161DomainTranslation elongation factor EFTu-like, domain 2Interproscan
IPR009000Homologous_superfamilyTranslation protein, beta-barrel domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR049393DomainSelenocysteine-specific elongation factor, 3rd domainInterproscan
IPR049394DomainSelenocysteine-specific elongation factor, C-terminal RIFT domainInterproscan
IPR050055FamilyElongation factor Tu GTPaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR43721ELONGATION FACTOR TU-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0001514Biological Processselenocysteine incorporationInterproscan
GO:0003746Molecular Functiontranslation elongation factor activityInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0006414Biological Processtranslational elongationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03833selB, EEFSEC; selenocysteine-specific elongation factor-Translation factorsko03012PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_65221-4.5 global RNA-seq network
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