Gene detail

Detailed information of Bpl_scaf_65186-0.15 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_65186-0.15	CYTOKINE RECEPTOR	Bpl_scaf_65186	9687	52990	+

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_65186-0.15

ATGTTTCGTATAGTTCGTTTGGAAATGTTTTTAGTAATTCTGTTTATAGTGATAACTTTCCCTAACATTGCTGTGAGGACAGAAAACACTACTGTATCGACAACAGACAGCACTAATGCGTCGACAACAGAAAACACTACTGTACTGACAACAGACAACATCAGTGTGTCGACAACAGAAAACACTACTGTACCGAAAACAGACAACAGCAGTGTGTCGACAACAGAAAACACTACTGTAACGACAATAGACAACATCAGTGTGTCGACTACAGAAAACATTACTGTTCCGACAACAGACAACAGCAGTGTGTCGACAACAGAAAGTATTACTCTACCGACAACAGACAACAGCAGTGTGTCGACAACAGAAAACACTATTGTACCGACAACAGACAACAGCAGTGTGTCGACTACAGAAATCATTACTGTACCGACAACAGACAACAGCAGTGTGTCGACAACAGAAAAGATTACTCTACCGACAACAGACAACAGCAGTGTGTCGACAACAGAAAACACTGCTGTACCGACAACAGACAACAGCAGCGTGTCGACAACAGAAAGCACTACGGTACCGACAACATATCCATCACCACCGGGTCTTCCAGCAAATGTAAGCGTTGTGGGTGTCACAAACTCTTCTACTGAAATTTCCTGGACTGCTCCTGAAAATGTTGGTGGTGGCATCACAAGCTATGTTATACGTTATATGTCCATCGTGGAGGATAACAATGATACAAGACATTGCAACAACACAATCATACGTGCAGAACAGATGGATACAACACAGAACAATGTTACAACAATTATTCTCGAAAATCTTCAAGCTTGGACATTGCACCATATAAATGTTTCTGCAAATTCATCCTATGGCGAAGGTCCAGCAGCCGTCAAAACAAGCAGGACAAATGAATCAGTTCCTGGTGCTATCAATAATCTAACCGTGGCTAATGTCACATCTCGTTCAGTTCAAATTTGTTGGAAAGAACCATGTCCTCGAAATGGGAACATTACAGCTTACGTCATAAATGTGTATTTATCTGATGAAGCGCAAAGGAACACAACAGAAACTAAGGAATTATGTCAAGTATTTGAAAAACTATTACCATGCAAAAATTATAGTTTTAATGTTACTGCCAAGACTAAGGTTGGGGAAGGAGTATCCCAATCCATAAGTGTACAGACACATACTGATGTTCCAGAACAACCGAAATCAGTTGACATTCGTAACGTCAGTTCTACATCTGTGACATTATACTGGGAGAAACCATGTAAACCAATCGGAATAATTACTGGATATAATGTCAGATATAATATAACTACAATTACAGCAAACTTAACCTGTCCAGTAGAAGAACAAAATATGACTATTAATGTTGACGGAAATATAACATTTCATAGAAATATAGCTGGTTTATATCCATGGACTACATATATGTTTTGCATTGCTGCACAGACCAGTTCCGGTAATGGTACTGAAATCTTTGACATTCGTAACGTCAGTTCTACATCTGTGACATTATACTGGGAGAAACCATGTAAACCAAACGGAATAATTACTGGATATATTGTCAGATATAATATAACTACAATTACAGCAAACTTAACCTGTCCAGTAGAAGAACAAAATATGACTATTAATGTTGACGGAAATATAACATTTCATAGAAATATAGCTGGTTTATATGCATGGACTACATATATGTTTTGCATTGCTGCACAGACCAGTTCCGGTAATGGTACTGAAATCTGTAAGGAACAACAGACTCTACAAGACCTTCCAGAACAACCGAAATCAGTTGACATTCGTAACGTCAGTTCTATATCTGTGACATTATACTGGGAGAAACCATGTAAACCAAACGGAATAATTACTGGATATATTGTCAGATATAATATAACTACAATTACAGCAAACTTAACCTGTCCAGTAGAAGAACAAAATATGACTATTAATGTTGACGGAAATATAACATTTCATAAAAATATAGCTGGTTTATATCCATGTACTACATATATGTTTTGCATTGCTGCACAGACCAGTTCCGGTAATGGTACTGAAATATGTAAGGAACAACAGACTCTACAAGACCTTGACATTCGTAACGTTAGTTCTACATCTGTGACATTATACTGGGAGAAACCATGTAAACCAAACGGAATAATTACTGGATATATTGTCAGATATAATATAACTACAATTACAGCAAACTTAACCTGTCCAGTAGAAGAACAAAATATGACTATTAATGTTGACGGAAATATAACATTTCATAGAAATATAGCTGGTTTATATCCATGGACTACATATATGTTTTGCATTGCTGCACAGACCAGTTCCGGTAATGGTACTGAAATCTGTAAGGAACAACAGACTCTACAAGACCTTCCTGGTGCTATTAATAACTTTACTGTGGTTAATGTCACATCTCGTTCAATTGAAATCTGCTGGAAAGAGCCATGTCCTCCAAATGGGAACATCACAGGTTACATCTTAAATGTGAATGTATCGGATGGAATACAAATGAACACAACAGAAACTAAAGAATTATGTCAAGTATTTGAAAACCTATTACCATACAAAAATTACAGTTTTGATGTTACTGCCATGACTAAAGTTGGGGAAGGAGTATCCCAATCTATAAGTGTAGAAACAGATACCGAAGTTCCATTGAAGCCAAAAGATGTTCGTTGTATTGTTATGAGCAGCACTGCGATTGAAGTATCATGGCAGAAAGGAGAATATAAAACTGGACCAACAAGCTACTCGGTATCAGCAATAGATGACGAAAATAATGCAAGCAAATACAATTGCAGCACAAACGGTTTTCAGCACACTACATGTATAATAACATCACTGGACGAGTATTGGAATTATACTACTGAAGTGACAGCATCTACTGACAAAGGGAGTTATATTTCTGATACTTGTTTCAATCAAACTAATCAAGACGCGCCCGGTTATGTCGAGTTCTTCAATGTGTCACAAATAGATGATCTACCTGGTCCAAGACGAGTAAGAATAATATGGAGACCACCGACTGAAAGAGAACAGAATGGAATTATAACATTCTACAATATATCATGGACTCCTGAAGGGGGACAAGTCAACTCGACACACGTAACTTCTGATCTTCGTAATTTGACAGTTGAAGTTAAAAGTAACATCAAATATACATTCGCTATTCATGCAGTAACAATAATGCCAGGAAAAGGCAATGAATCGGAATTATTCATTCAGCCAGGAGTGCCAAATAAACCAAGAGAAAATGCATCATATCCTTTGATACAACAATCAACGATGACCTTAGAGGAACCACGAAGGCAAATAGCTGTTACATTATTACCAAAGAAAGTATTATGTGGGGATACCAATGGTGAACCAAACCTTTGGGGTGTAATAGTATCATCCGATGAGAAAGCTGAAACTGATGAGCCGTATTCTGGATCACGAACAATGTACACTAAGACACCGACATACAATAGGACATGGCATTTAGCATTTAAACAGCGTCCAGTGTCACCCTACCGAGTTACCAAACAGTCGTGGATGCCAAAAAACTGTTCTGGAAAAAATGCAAAAACAGTCACAGATTCAGTTTTTGTGGTTGGAACAGATTACGTATGTTCTCTTTCAGATGAACATTGCAATGGCTATCTAGATCCAGGCCAGCTCTATAGAGTTAAAGTTTTCTGGTGTACAGATACTGCATGTACAGAAACTGAATACTCCTTACCTATAGCTACAGCGAGGGAAGAGAAAGAACCAACACAAAATCTATCAGTAATCATTGCTTCTGTAGCAGGCTCCGCCTTGGCTTTCATAATAATTGGCATTGTTTCTATATACATCTGGAGACGTCAACTGGCATGTTTTATGAAAAGAAAGACTAATGCAGAAGATGGTGAGGATAATGTAACATTTGTAACAGAGAACCATGAAGACAAACGTAAAAAAAGGCCGATAAGATTGTCAGATTTCCATGCACATTTTGAAACCTTGTCAGAGAAATCCAATCTACTGTTTTCTCAAGCATACAAGGAACTGAATGCATTCAGCCCGAAATTCTCAAGATCAGACGCAGAGCTTGAAGAGACAACAATTAAAAACAGATATACTAATATATTACCTTTCAACAAGACTCGAGTTAAAATTATTGGAGCTGACGACGAACCAGGATCCGATTATATAAATGCAAACTATGTAGCGGGATTTTCCTCTGGCAGAGAATACATCGCTACGCAGGGACCAATACCATCAACAATAAACGATTTTTGGAGGATGATTTGGGAACAGAATGCCAGTATCATAGTTATGCTAACCCAATGTATCGAAAGAGGAAGGACAAAATGTGAACAGTACTGGCCTAATGATATTAACGAGTCTGTGTTTTACGGTGATATTGTTGTCCACATGGAAAGTGAATCTCATTTACCAGATTCTATTCTCAGGATATTTGTTTTACGACTTGGAGATATTGAAAGGAGAGTACGACATTATTATTATTTAATATGGCCAGACGTGGGGGTGCCAGATTCTACTGATTATATGCTAAGATTTGTTGATACGGTGCGGTGGGATATAAGATCTGACATGATTGGTCCCATTGTCGTA

Transcript

Bpl_scaf_65186-0.15

TATGTATACAGTTGTTATAAAACTTTTATCACATGCTGTACAAATAAAAATATTTCTGTTCGTATACTGAAGAACGGTGTGGTGAACAGGAAGCATGTTTCGTATAGTTCGTTTGGAAATGTTTTTAGTAATTCTGTTTATAGTGATAACTTTCCCTAACATTGCTGTGAGGACAGAAAACACTACTGTATCGACAACAGACAGCACTAATGCGTCGACAACAGAAAACACTACTGTACTGACAACAGACAACATCAGTGTGTCGACAACAGAAAACACTACTGTACCGAAAACAGACAACAGCAGTGTGTCGACAACAGAAAACACTACTGTAACGACAATAGACAACATCAGTGTGTCGACTACAGAAAACATTACTGTTCCGACAACAGACAACAGCAGTGTGTCGACAACAGAAAGTATTACTCTACCGACAACAGACAACAGCAGTGTGTCGACAACAGAAAACACTATTGTACCGACAACAGACAACAGCAGTGTGTCGACTACAGAAATCATTACTGTACCGACAACAGACAACAGCAGTGTGTCGACAACAGAAAAGATTACTCTACCGACAACAGACAACAGCAGTGTGTCGACAACAGAAAACACTGCTGTACCGACAACAGACAACAGCAGCGTGTCGACAACAGAAAGCACTACGGTACCGACAACATATCCATCACCACCGGGTCTTCCAGCAAATGTAAGCGTTGTGGGTGTCACAAACTCTTCTACTGAAATTTCCTGGACTGCTCCTGAAAATGTTGGTGGTGGCATCACAAGCTATGTTATACGTTATATGTCCATCGTGGAGGATAACAATGATACAAGACATTGCAACAACACAATCATACGTGCAGAACAGATGGATACAACACAGAACAATGTTACAACAATTATTCTCGAAAATCTTCAAGCTTGGACATTGCACCATATAAATGTTTCTGCAAATTCATCCTATGGCGAAGGTCCAGCAGCCGTCAAAACAAGCAGGACAAATGAATCAGTTCCTGGTGCTATCAATAATCTAACCGTGGCTAATGTCACATCTCGTTCAGTTCAAATTTGTTGGAAAGAACCATGTCCTCGAAATGGGAACATTACAGCTTACGTCATAAATGTGTATTTATCTGATGAAGCGCAAAGGAACACAACAGAAACTAAGGAATTATGTCAAGTATTTGAAAAACTATTACCATGCAAAAATTATAGTTTTAATGTTACTGCCAAGACTAAGGTTGGGGAAGGAGTATCCCAATCCATAAGTGTACAGACACATACTGATGTTCCAGAACAACCGAAATCAGTTGACATTCGTAACGTCAGTTCTACATCTGTGACATTATACTGGGAGAAACCATGTAAACCAATCGGAATAATTACTGGATATAATGTCAGATATAATATAACTACAATTACAGCAAACTTAACCTGTCCAGTAGAAGAACAAAATATGACTATTAATGTTGACGGAAATATAACATTTCATAGAAATATAGCTGGTTTATATCCATGGACTACATATATGTTTTGCATTGCTGCACAGACCAGTTCCGGTAATGGTACTGAAATCTTTGACATTCGTAACGTCAGTTCTACATCTGTGACATTATACTGGGAGAAACCATGTAAACCAAACGGAATAATTACTGGATATATTGTCAGATATAATATAACTACAATTACAGCAAACTTAACCTGTCCAGTAGAAGAACAAAATATGACTATTAATGTTGACGGAAATATAACATTTCATAGAAATATAGCTGGTTTATATGCATGGACTACATATATGTTTTGCATTGCTGCACAGACCAGTTCCGGTAATGGTACTGAAATCTGTAAGGAACAACAGACTCTACAAGACCTTCCAGAACAACCGAAATCAGTTGACATTCGTAACGTCAGTTCTATATCTGTGACATTATACTGGGAGAAACCATGTAAACCAAACGGAATAATTACTGGATATATTGTCAGATATAATATAACTACAATTACAGCAAACTTAACCTGTCCAGTAGAAGAACAAAATATGACTATTAATGTTGACGGAAATATAACATTTCATAAAAATATAGCTGGTTTATATCCATGTACTACATATATGTTTTGCATTGCTGCACAGACCAGTTCCGGTAATGGTACTGAAATATGTAAGGAACAACAGACTCTACAAGACCTTGACATTCGTAACGTTAGTTCTACATCTGTGACATTATACTGGGAGAAACCATGTAAACCAAACGGAATAATTACTGGATATATTGTCAGATATAATATAACTACAATTACAGCAAACTTAACCTGTCCAGTAGAAGAACAAAATATGACTATTAATGTTGACGGAAATATAACATTTCATAGAAATATAGCTGGTTTATATCCATGGACTACATATATGTTTTGCATTGCTGCACAGACCAGTTCCGGTAATGGTACTGAAATCTGTAAGGAACAACAGACTCTACAAGACCTTCCTGGTGCTATTAATAACTTTACTGTGGTTAATGTCACATCTCGTTCAATTGAAATCTGCTGGAAAGAGCCATGTCCTCCAAATGGGAACATCACAGGTTACATCTTAAATGTGAATGTATCGGATGGAATACAAATGAACACAACAGAAACTAAAGAATTATGTCAAGTATTTGAAAACCTATTACCATACAAAAATTACAGTTTTGATGTTACTGCCATGACTAAAGTTGGGGAAGGAGTATCCCAATCTATAAGTGTAGAAACAGATACCGAAGTTCCATTGAAGCCAAAAGATGTTCGTTGTATTGTTATGAGCAGCACTGCGATTGAAGTATCATGGCAGAAAGGAGAATATAAAACTGGACCAACAAGCTACTCGGTATCAGCAATAGATGACGAAAATAATGCAAGCAAATACAATTGCAGCACAAACGGTTTTCAGCACACTACATGTATAATAACATCACTGGACGAGTATTGGAATTATACTACTGAAGTGACAGCATCTACTGACAAAGGGAGTTATATTTCTGATACTTGTTTCAATCAAACTAATCAAGACGCGCCCGGTTATGTCGAGTTCTTCAATGTGTCACAAATAGATGATCTACCTGGTCCAAGACGAGTAAGAATAATATGGAGACCACCGACTGAAAGAGAACAGAATGGAATTATAACATTCTACAATATATCATGGACTCCTGAAGGGGGACAAGTCAACTCGACACACGTAACTTCTGATCTTCGTAATTTGACAGTTGAAGTTAAAAGTAACATCAAATATACATTCGCTATTCATGCAGTAACAATAATGCCAGGAAAAGGCAATGAATCGGAATTATTCATTCAGCCAGGAGTGCCAAATAAACCAAGAGAAAATGCATCATATCCTTTGATACAACAATCAACGATGACCTTAGAGGAACCACGAAGGCAAATAGCTGTTACATTATTACCAAAGAAAGTATTATGTGGGGATACCAATGGTGAACCAAACCTTTGGGGTGTAATAGTATCATCCGATGAGAAAGCTGAAACTGATGAGCCGTATTCTGGATCACGAACAATGTACACTAAGACACCGACATACAATAGGACATGGCATTTAGCATTTAAACAGCGTCCAGTGTCACCCTACCGAGTTACCAAACAGTCGTGGATGCCAAAAAACTGTTCTGGAAAAAATGCAAAAACAGTCACAGATTCAGTTTTTGTGGTTGGAACAGATTACGTATGTTCTCTTTCAGATGAACATTGCAATGGCTATCTAGATCCAGGCCAGCTCTATAGAGTTAAAGTTTTCTGGTGTACAGATACTGCATGTACAGAAACTGAATACTCCTTACCTATAGCTACAGCGAGGGAAGAGAAAGAACCAACACAAAATCTATCAGTAATCATTGCTTCTGTAGCAGGCTCCGCCTTGGCTTTCATAATAATTGGCATTGTTTCTATATACATCTGGAGACGTCAACTGGCATGTTTTATGAAAAGAAAGACTAATGCAGAAGATGGTGAGGATAATGTAACATTTGTAACAGAGAACCATGAAGACAAACGTAAAAAAAGGCCGATAAGATTGTCAGATTTCCATGCACATTTTGAAACCTTGTCAGAGAAATCCAATCTACTGTTTTCTCAAGCATACAAGGAACTGAATGCATTCAGCCCGAAATTCTCAAGATCAGACGCAGAGCTTGAAGAGACAACAATTAAAAACAGATATACTAATATATTACCTTTCAACAAGACTCGAGTTAAAATTATTGGAGCTGACGACGAACCAGGATCCGATTATATAAATGCAAACTATGTAGCGGGATTTTCCTCTGGCAGAGAATACATCGCTACGCAGGGACCAATACCATCAACAATAAACGATTTTTGGAGGATGATTTGGGAACAGAATGCCAGTATCATAGTTATGCTAACCCAATGTATCGAAAGAGGAAGGACAAAATGTGAACAGTACTGGCCTAATGATATTAACGAGTCTGTGTTTTACGGTGATATTGTTGTCCACATGGAAAGTGAATCTCATTTACCAGATTCTATTCTCAGGATATTTGTTTTACGACTTGGAGATATTGAAAGGAGAGTACGACATTATTATTATTTAATATGGCCAGACGTGGGGGTGCCAGATTCTACTGATTATATGCTAAGATTTGTTGATACGGTGCGGTGGGATATAAGATCTGACATGATTGGTCCCATTGTCGTA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00041	fn3	Fibronectin type III domain	Domain	Interproscan
PF00102	Y_phosphatase	Protein-tyrosine phosphatase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000242	Domain	Tyrosine-specific protein phosphatase, PTPase domain	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR029021	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR050713	Family	Receptor-type Tyrosine-protein Phosphatases/Ushers	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46957	CYTOKINE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004725	Molecular Function	protein tyrosine phosphatase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0006470	Biological Process	protein dephosphorylation	Interproscan
GO:0043235	Cellular Component	receptor complex	Interproscan
GO:1990264	Biological Process	peptidyl-tyrosine dephosphorylation involved in inactivation of protein kinase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K05694	PTPRB, PTPB; receptor-type tyrosine-protein phosphatase beta	EC:3.1.3.48	Adherens junction	ko04520	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_65186-0.15 global RNA-seq network