Gene detail

Detailed information of Bpl_scaf_64954-0.5 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_64954-0.5	APOPTOSIS-INDUCING FACTOR 1	Bpl_scaf_64954	6678	42250	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_64954-0.5

AAATATACCTCCAAACAGTGGAAGCATGTACCGGCGAAGTTTTATTTTTTCCACTGCTTCTAGAACGTGTTTAACAGATAAATTAAACAGAAAATTATTTGAATCCACTGGTTTCAATTTACCTATTGTATGGTTAAATACAAGTCCTGTATCACAGCAACATGCAAGATGTATGTGTGGTCACACACCATTACACAGGAAGACTCTTCATCAGACTCCAAACATACCAAGACATACAGCTGTATTAAATATGACAACTACCAATGGTGGTCGGAGGAAGAACTACCAAGGGAACAAACATAGTAACAAAACATTGTGGTTGATGTTGGCTGGAACTGGATTGTTTACTTATTCGGCATGGAAAGCTCGGCATGTTTTACAAAATCAGAAAAATCCATATATTATTTATGCTGCTTCAGTAGAAGAAAATACATCATCAGAAACCAAACAATCAAGACTTGAGTCAAATTCTCTATACATGACAGAAGATAATGAAGAAATACCATCATACGTACCGTATTTATTAATAGGGGCAGGTACAGCCTCCCACAGTGCAATGAGAGCAATTAGATTAAAAGATCACAAAGCTCAGGTTTTAATTGTTGGAGATGAAGATAAAAACCTGTACAGTAGGCCTCCTTTATCTAAAGAATTGTGGTATGGAGAAAAAACAGGTGTTTTCTATGATCCAGAAGCCTTCTATGTAGAGCCTGAAGATTTACCCTCAAAGCCATATGGTGGAGTGTCTGTTCTGAAAGGTAGAAAGGTAACAAAGTTAGACAGAGAAAAGAAAATAGCATACTTGGACAACGGAACTAAAATAGAATATGGCAAATGTTTAATAGCTACAGGTGGTCGACCCAAAAATCTGCCAGTATTTGAACAAGCTGAAAAAGCAGTGCAGAAGAGAGTTCATGTATTTAGAAATATAGATGACTTCTTGTATATACACAGACTAGCACACACATCTAAATCTATCGCAGTGATAGGTGGAGGATTTCTGGGAAGTGAACTGGCATGTGCTTTAGGATACAAAGGTGAAAGCAGAGGTATGAAGGTCTATCAAATTTTCCCAGAAAAAGGAGTTATGTCCAGAGTATTACCAGACTACCTCAGCGAGTTTGCCACAGAGAAAATTAAATTAGAGGGTGTAGATGTCTTAACAGAAAAATCAGTGAAGTCAGCTTCATACAGTGATAAGCAGGTTGTTTTAAGGCTCACCGATGGCAGCACAGTTAAAGTTGACCATGTTGTGGTAGCTGTTGGTTTACAACCAAATGATGATATCGCCAAGAGATCAGACTTAGAAATAGACTCAGTTAGAGGAGGCGTGATGGCAAATCCTGAGTTAGAGGCTAAACCTGACATATGGGTGGCAGGTGATGTTGCCAGTTTCTTTGATTTCAAATATGGCAGAGGTCGTGTAGAGCATCATAGTGTAGCAGACGCCATGGGTAAACTAGCAGGACAAAATATGGCAGGAGCCAGGAAACTGTATAAACATCAACCATATTTCTGGTCAGATTTAGGAGCAGACGTAAGTTATCAGGCGATTGGTGAAGTGGATTCAAGTTTAGAAACTTACAGTGTGTTTCTCAATTTACCTCGGAAATACAAAACAAAGGACGAGGAGTCTTCAGAAAAAGAAGGGACCAATTCTGAGTCGTCAAAGAACACCGTGATTTCTCAAGTAACAGATAAAGAAGATTTTTTACAGGGAGTAGTATTCTACTGTAAGGAGGGAATTATTGTTGGCATTGTTTTATGGAATATTTTTGGAAGAGGAAAAATAAATGCTGCTAGACAGATTTTGGAGAAGAATAAAGAACTTAAGAATGAAGACTTGTATGAACTTTCCAAACTATTATTCCGTAGTTATGCTAAACCTTCTTGATGAATGTGATAATAGTGTTATCTCGACTTCAACATTTGTAGTGAGACTTAGAGGTATTGGCATTACTTTTCCTGTGGCATTTTTTTTATTCTTTCAATTTTTAAACTACGATTTGTCCAAGGTTTGCAAAGCTATTTGGGCGATTACTTATATTTAAACATGTACGTCTCGCCAAAATATGTCATGTGATTTTTTTTTAATGATTAATATACTCCAATAGATATGGCCTGAACTGAATGTTATGGAAGTTATGGTGTTTAATGCCACTTTGAACAATATTTCAGTTATATCGTGGCGTCAGTTTTATTGGTGGAGTAATACACCGACCTTCCGCAAGTCACTGACAAATTTAATCACATAATGTTGTATCGCGTTCACCTCGCCTGATCGAAATTCGAACTCACAATATTAGTAGTGATAGGCACTGAATGCATAGGTAGTTGTACATCCAACTACCATACGATCATTGTCCATGCATAGACAAGTAATCAAGACATCTTCATGTGTCCATGTATAGACGAGCAAGATATATATATATCTCTTTATCTGCCATTGTTCAATCATAGACAAGCAAGATACATGTATCTCTTTATCTGCCATTGTTCAATCATAGACAAGCAAGATACATGTATCTCGTTATCTGCCATTGTTCAATCATAGACAAACAAGATATATATTTATGTATTAATGTTCATGCCCAAACAGGCAAGACATCTTCATGTGTCATTGTTCATACACAGGCGAGACATTTGCATAAGTCGTCATATATGCATAGATAGGCGAAATATCTTCATGTGTCATTGACCACACACAGGTCAGGCATCTTCATTTTGTATTGCCGAAGCTCTGACAGGCGAGATGCTTTCATGTGTCCACACTTGATATTCTTATATGAACGAATAAAGATAAAATCTTAAAAAATATATGCATGGAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07992	Pyr_redox_2	Pyridine nucleotide-disulphide oxidoreductase	Domain	Interproscan
PF14721	AIF_C	Apoptosis-inducing factor, mitochondrion-associated, C-term	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016156	Homologous_superfamily	FAD/NAD-linked reductase, dimerisation domain superfamily	Interproscan
IPR023753	Domain	FAD/NAD(P)-binding domain	Interproscan
IPR029324	Domain	Mitochondrial apoptosis-inducing factor, C-terminal domain	Interproscan
IPR036188	Homologous_superfamily	FAD/NAD(P)-binding domain superfamily	Interproscan
IPR050446	Family	FAD-dependent Oxidoreductases and Apoptosis Regulators	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43557	APOPTOSIS-INDUCING FACTOR 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0006915	Biological Process	apoptotic process	Interproscan
GO:0012501	Biological Process	programmed cell death	Interproscan
GO:0016174	Molecular Function	NAD(P)H oxidase H2O2-forming activity	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0016651	Molecular Function	oxidoreductase activity, acting on NAD(P)H	Interproscan
GO:0033108	Biological Process	mitochondrial respiratory chain complex assembly	Interproscan
GO:0046983	Molecular Function	protein dimerization activity	Interproscan
GO:0050660	Molecular Function	flavin adenine dinucleotide binding	Interproscan
GO:0071949	Molecular Function	FAD binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04727	PDCD8, AIF; programmed cell death 8 (apoptosis-inducing factor)	EC:1.-.-.-	Apoptosis	ko04210	PMID: 28812709
			Apoptosis - fly	ko04214	PMID: 28812709
			Necroptosis	ko04217	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_64954-0.5 global RNA-seq network