Gene detail

Detailed information of Bpl_scaf_64483-2.15 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_64483-2.15	ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 53	Bpl_scaf_64483	277466	285070	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_64483-2.15

AATGATAAGATTTTCTTTCAATATGAACATTACACTAAACGAAAGTCTTCTTCTTCTTCTTCGTTTACGGAACATCCATCAACATATTGATGATTATTTTCCGGCGCATGCCTGGTTTGGCATTTAATAAAGTTACATTTTTAGTATATTTTACAATTTTTACCATTTTTTATGACAATTTCAATTTTTTGCATTTTTTATTTTTTATTTTTTGTGTATAAGATAAAAACAAAATGAGTGTTTACTGTAAGTGTGGGAATGTTTCAAGGAGCAAACTGTGGGAAAGTGCTTCCTTGTCTTAAGAAGCTATGACTATGCTATAACTCTCTCGTTTTTTATGTCGTACCTGCTCGTAATGCAATTCACACTAAAAAAAAAATAGAATTAAAATATTTATGTGTCCGGGACGACTTGGGCCAAGAACGACTTGTTGCCTAAACATACCGGAAGTTGCAAGAGTTATCGACCTATTTTCATCCCTAGCGGTAGTTACCATTGTCAACAATGGACTCCTGTTCAGGAAGAACAGAAATGGGTTAACTTTCCCCGAAATTGAGTCTAATTTCTAAGATATATTTGTTATTGAATGGAACACTAACTTTAAATATTCAAAATGTCTGATCTGACAAAAATAGGAAGTAGTTTGGATTCAGCCAAATCTAGAAAACGTCGCCCACCACGATTTGCAAATATTAACGAAAAGAAAATTGCTGATGATGAATTTATGGCTGCCGCTATTGGTGATGTTGAATGGCTAAAGCAAAGTTTACGTGAAGCAAAGGGACAAATTAATTTTGACAAAAATGGTTTGTCAGCATTACATTTAGCTTCAATACATGGTAGATTGGAATGTTTAAAAATCCTCATTGAAAAGTATAAATTTAATATAAATCTACCTAGTACAACTGGCTGGAGGGCAGTTCACCTGTGTATAAGCAACCAGACAGGAAAGAGAGCACTTGATTGTTTAAAGTACCTGTTAGATAAAAAGGCCAATGCATCTGTTGCTAACAATGATGGCATCACACCAGTTCATCAGGCTGCCTCTGAAGGTCATGTTCAGTGTTTAAAATTACTGATAGAAGTGGGAGCCAAGCTTGATGGTAGAGATTGTAGAGGACACACTCCACTAGATCTAGCTAAACTGTGGGGCCACAAAAAATGTGCAAGAATTCTTGCTGCTGAGATATGGCATCAGGATAAAGATGGTGTTGCCAAGGAAATGGGACAGCTAAAAACATTAAAAATGCAACAAGTATTGAAAGAGCTGGAAGAAGCAGAGGATCTTCAAAAGGCACAAGAATTCTATGGAGAGCAATCTTACCAAGAATGGATGAAGAAGAAAAATCTTCAAGATCCAAGACAAAAAGATACGGAAAAGGACAAAAGGAAAACTGGACGAGAACCATTACAGAAAGCCAACAGTAAGGCACCCCCTCAAGATCAAGTCAAAGATACGGATAGTAAGATCCATGTTTCATTTGAACAATCAAGTACTCCTACACCAGGAGCTAAATACAAACGTGGATTCTCTTTTCATAGTTCAGAAGATGGTGGAAAGCTTGATGATCAGGAAAATATAGAGAAGAAAAAAGAAAGAGCTAAAACAGCTTTGGTGGTACATCCTCATGACTGGAGATTAGCGGTACACCCACCAAAGACAACCTATACCAGCAATCTGACTGATGATTATCCAAGAGATATGTTCACAATGATGCCAAAAAATAAATATGCTCCAATGTACTATGATGGAAAGTTTGGAAATAGAATTAATGTCATGGATGAAAATTCCAAGAATAGAAAGTTGAAGTCAATGAAGATTAAAAAACCTAATTTACCAGAAGAAGTGATAGAGAAATATCTGTCAAATGATCCTTCAAAGCTAGAGAGACCAATCATATTTAAATCTAAACACATCTCTGATGTCAATAAGAAGAAGAAGTATGAGGATGATGTTAAAGGAAAAGATGAAGTCACCCTACATTTATGTGAAGACTTTTCCTCCTTTATGTATCGTAATGCCCTATTAAGAGCAAACACAGTTGATGTGATTGGTCGTCCTGGGTCAGCTGACTGGCAGAGTAACAATTACCCCACAGATTATGTTGTTAATACGTTAAAGACTATGAATAAGCCAACACACTTCCCTAATATAAAAGGCAAGGAATATGTACTAGGAATTTACTGATCAATTTGTCTTTTTACCTGTTATTGCCGTTTGTCAATGCACTTGTTTGCTAATATTGAAACATGTATAGACTGTCTACCACTGGGACCAAAATGTTTGGTCGAGATAAATGATTGAATGTATTTCTGTTAGGATATTGATAGAGAAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF13637	Ank_4	Ankyrin repeats (many copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR042335	Family	Ankyrin repeat domain-containing protein 53	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24160	ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 53	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000922	Cellular Component	spindle pole	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007080	Biological Process	mitotic metaphase chromosome alignment	Interproscan
GO:0031116	Biological Process	positive regulation of microtubule polymerization	Interproscan
GO:0060236	Biological Process	regulation of mitotic spindle organization	Interproscan
GO:1902412	Biological Process	regulation of mitotic cytokinesis	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for Bpl_scaf_64483-2.15 global RNA-seq network