Gene detail

Detailed information of Bpl_scaf_64340-3.5 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_64340-3.5	CYTOCHROME P450 FAMILY 7	Bpl_scaf_64340	370856	374359	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_64340-3.5

GAAAAGCTATAGTTTGATAGAAACAATTTATACTGAAATATACGTCAGTTGTTGAAAGGAGACACAGTTACTACACAAACCAAATACAGCAAATTACTACATAGAAAAGACAAAGCAAAACTTGAGGAAAACTTCTAAACAAGCAGAAAAATGGTGGCTTTAACTTCGTATCTACTGGTATTAGCGATAGTGTGTGTGGTAGCTTACTTCAAATTTTTATTCAGACGAAGGAGAGAAAATGAGCCTCCGATACCAAGAGGTCATTGGTTTTGGGGCAACGGTGGAGATTTTGCTAAGAATGCAGTCAGTTTTCTACACGAGAGTCAGAAGAAACTTGGAGATATATTCACAATTCGACTTTTTAATCAACATATGACAGTTATCATGGATCCTCATTCTTATGACTCGTTTGCTAAAGAGAGAAACTTTGACTTTGATGTTATTCAGAAGCAAGTTAATCACAACGTATTCAGTTTCGAGTTAGTAAATGCAAGAAAAATGATAAAGGAAGCTGGCAAAACCGTGAAAGGACCTTACTTAAACAAAGGAATGTCTCAATTCTCGTCATATCTTAACGAGACCTTCCAAGATGTTACTCAATCCGACTCCATCGAGCAATCTGATGAATGGAAAACGTCCGGTCTTCGTTCCTTCAACTCGAAGACGCTATTTGCTTCACTGTTTTATACAATTTTCGGAAAGGGCGATGTTAATGATCCAAGATTCAAACCAATGAATGTTTACCAGGATTTTGATCTTTTCCACAAATATTTCAACTTTCTATGGCTTGGAATGCCCGTCAAAATGTTCCCAAAAGCAGTTAAAGCATTGGAAGGACTTTGCCAACAACCGTGTTCAAACGAACTTCTTGAGAGAGAAGACCTTTCGGAGTATATCAGATTTTCTACTCAATTCATGTTAAATCACAACCAAACCGAACAGGACATCATTGGACATAATTTGGTATATCTCCATGTGAACTACAACACATTTAGATTAGCCTTCTGGACTATATACAAGCTGTTGGAACATAAAGACGCATTGGAAGCATTACGTCAGGAAGTCGAAGAAGTGATTCGTTGCAAGCGTGCTGAAATGGATGATGATGACGAAGAAATTGTATTCAGCATGGATGAAATTGAATCATTAAAAGTTCTTGACAGCATTATCCAGGAAACACTGAGAGTTGCTAGTGGTGTATTCATGGTCAGATCAGTCCTTGAAGATACAGAATTTACAACAACAAACGGAACACCACGCACAGTGCGAAAGGGTGATAAAGTTGCCATTTATCCACCAACAATTCATAAAGACCCAGAAATATTCGAAAACCCTGAGGAATACAAATTTGACAGATTCATAGATGCCAAATTTTACAAATACGGAAAGCAGATTAAAAATCCAATTATAGCGTTCGGTTCATTGTGTCCAGGAAAAAAATACGCAATTACACAGTCAAAGTGGTTTTTGTTATCGTGTATATATTCATTCGATATGGAACTTTGTAGTGGTGAATCAACAATTCCTGATATTAACTACTATGGACATGAAATCCTTCCGCCAACCAAAGAAGTGCAAGTACGATACAAACTCCGACAAAACATTGAGAAATTATCATTTGTATAACATAACGGAAAACTGTTGCATTTAAAAGGACACGTCTCGAAACTGTTTAATTTATTAATGTATAAATGTGATTTATGTCCGGCATGTATCAGAGGAGTATTAGAATATTTGATATGTTATTACTATGTGCAGATTTTATTTTTTATACAAAGAGAAACAATTTAAAAGTCCCCACTTACTCATACATCATATATACATTTTTTGTATGATTGTTGTGATATTTTAAACAAGGTTAGTGTAGTCTTTCCCAGATTGTTATACGGGTAAATGCGCATTCGTGTTTATTTGAAAAAAATATGTGTATGTATGTATGTATGTATGTATGTATGTATGCAAAGTCGAGTGTTAATTTGAACGCTTGATATATGTGTTTGCCTTACCAAGAGGGAAGTTCCAGTTGTTAATTTATATGTGCATAGTATTGTTTGTTATTGAATGTGAATGAGTAACAGTCAAATGTTAAAATGTGAGGAGTCATGTTTGTACGAGCGAGTATGAAAAAAGTATGAGCGTGAATTTCACCAAGTATTTATAGAATGACCTAAACCATTTCCATTTGATCAAACATTTCATTATTAATTTATTAAATACATTTTGTTATGATTGGAATGGAGAGCTGCATTTCGAATTTTGATCACTGCCAAAAATATTTACATGTTAACCAAATTTAGGTTACATTCCAAATTAGGTTATACATTCCAAATGATATGTTATAATCATATTAACAAATGTTGAATATTCCATTTCATATTTTTTTTTATAACAAATGTTGAATATTCCATTTCATATTTTTTTTTATAACAAAGTGCTATTTTCCAACATTTTCATATCATTG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00067	p450	Cytochrome P450	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001128	Family	Cytochrome P450	Interproscan
IPR002403	Family	Cytochrome P450, E-class, group IV	Interproscan
IPR024204	Family	Cytochrome P450, cholesterol 7-alpha-monooxygenase-type	Interproscan
IPR036396	Homologous_superfamily	Cytochrome P450 superfamily	Interproscan
IPR050529	Family	Cytochrome P450, sterol 14-alpha demethylase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24304	CYTOCHROME P450 FAMILY 7	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004497	Molecular Function	monooxygenase activity	Interproscan
GO:0005506	Molecular Function	iron ion binding	Interproscan
GO:0006699	Biological Process	bile acid biosynthetic process	Interproscan
GO:0008395	Molecular Function	steroid hydroxylase activity	Interproscan
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan
GO:0020037	Molecular Function	heme binding	Interproscan
GO:0042632	Biological Process	cholesterol homeostasis	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00489	CYP7A1; cholesterol 7alpha-monooxygenase	EC:1.14.14.23	Primary bile acid biosynthesis	ko00120	PMID: 28812709
			Steroid hormone biosynthesis	ko00140	PMID: 28812709
			PPAR signaling pathway	ko03320	PMID: 28812709
			Bile secretion	ko04976	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_64340-3.5 global RNA-seq network