Gene detail

Detailed information of Bpl_scaf_64229-1.5 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_64229-1.5	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	Bpl_scaf_64229	137906	146622	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_64229-1.5

ATTTTTTTCAAGCACCTGTTTAACGTGTGCGTTCCTATTAATTACCATCTACCCCGTACCCGGCACGATGGCTGATCTTCCAGAAGGGTGGGAAAAGAAAATAAGTCGCTCTAATAATAAGGAATACTATTTGAATATTTATACCAAAGAAAGTCAATGGGACATGCCGACTGCTCCGGCTAAACAACAAGGTGCTACAGTACAGGCATCACATTTGTTGGTAAAGCACAGAGACTCACGGCGACCATCGTCATGGAGAGAGGAGAATATCACTCGAACCAAAGCAGAAGCATTAGAACTTCTGAATGGTTACCGTGAGCAAATAGTATCTGGTGGAAAATCATTTGCAGAGCTGGCGTCTGAGTTCAGTGATTGTGGTTCAGCTAAAAGAGGTGGAGATTTAGGTCCATTTGGAAGAGGACAAATGCAGAAACCATTTGAAGATGCCACATACGCATTGGAAGTTGGAGAATTGAGCCAAGCTGTTTCTTCTGATTCCGGAGTTCATATTATTTTAAGAACTGCATAATATAGTTTTGTAGAATATCGTATCTATTTGTTATAATATAACAGAGTAGTGAAGTACTATCTGTGTCTGAGCAAAAATATATATAATTACAGGGCATTCCACTCATTTTCAAATAGGAGGTGATAATCCTAAAGTAGAAGGGCAGGAATTTTTCTAACATTCCCCATGGTCTGGTAAAAAGACCTTTTCCCAATGAAAAATATTCTAAAATCATGCAAAATTCCCGAAATTTTCATTCTTACCACTTATTTGGATTCCGAATTTGAGCAATTTAGATTGCAAAAGATAAATCAGTGTGCAAAAAGTAAGACATATTTTACTCTCACTTTGACATTTTCAATTTTGAAAACAAAGTAGTGGGGGGAATGCAATTAAACAGGTAATTAGCTCTATGCCTGGCTGCTATGGAATGTCCTGACTTATATAATTGTTAATGGTTACATCGTTATTACAGGTTACAATCTAAATGTTTTAATACAGTCAAACCTGTCTAAACCAAACTCTGAATAAACCGAACTTTAAATGAAGTCTTAATGCAGACATTCTTTGTTAATTTAACTTGTGCAAACCGAACACCTGTCTATTCCGAACACAACAATTGATCACAAGAAGGTTCAGTTTAGACAGGTTTAACTGTACAATCAAACCTGTCTAATGTGACCTTCCAAGGGAACATTGATTCAACCAGTCACATAAGACAGGTAGTTGCTTAATAAAGGTTTTATCATTATGAAATGCACGTCAAAGAGAAGTAAAAATTATGGTCGAGCAAAACAAGCTATTGCTTAATACAGGTCACGCAGGACTTACAATATTTTTCAAGTCTACCAGTACTTCACTATTTACAGGCGGTACTTTTTATTACAATTTGAACAATTTCCATGAATATCTTATACAACACTTTTTAAAATCAGGAGGTACCAATGACCATTTTAGGCAGTACTGCCCCTTATTGAAAGGCCTGCAGGTGGTTGCTAAAGCAGGTTTGACTGTACAATGACAAAGATTTGCAGTCATATCAATAGTATTGAAATGCTTTGTATATGTTAACACTTACATTTGGCGAATCTTAAGTAATTACGTTTTACTTGTTATTCTTTTTAAGTCTCTAAAACAAAGCTTTTGCTCTATTTCTCATTAAACTCAGTGATATTTGTATCAAATGCAGATCAAGTTCATATTTGGTAGATATAACTCCTACCGTTTACTTAAACATATTAACGTAACGGGTGGAAACATGATCTTCTTCCAATCATACCATTATATTTTCATCTTTTTTATTTATTTATTTTTTTTACTTTAAACGCCTGATGAAGGTTATTTCAGAAACGTTTCATGCACACTAAAGTAAATATTTAAGTTTGTATTATTTCATATTTTTGTTAATCTTGTTTGTGTAACATAAGATAATGAAAGGAAAAAAAATAATTTCATATAATGCCAGTAGGTAAAAAGATTTTCTGTTTAGATCAGAAATATATACAGAACAAGTTTAGACATTTTGATTATTTATTTTGCAGCTGTGCTATTTATCCTTTCAGACGGTATATCTATGTTTGGATTACATTATTTTTGTGTTCAAAACTCTCGCAATATTTCAGTATTAAATGTATATATCTTTGTTTCATTAAGATTTTTTTTTTTTTTTTATATTAAGAGTCTCACAGAGAAAAGAAGAGATTTTGCATTTGTTTGTACCATAGTTTGTCATATACAGTGCACATTTTTTTCAGCCAAAAGAAAAAATATTACCATGCTGGGAGTGGGTGTGTATTGTACACAAAAATTCAGAATGGTTGTATTCTTGTTGCTATTAGTTACAAATGTATTGAAAAGTCAAAAGGATTTTAATGTGTACTTGTATAAGACCAATTACGGTAATGTGTACTTACAGTTTTATTTTGTCATTGGTTATCGGTTTTTTTTCTAATAGGGTACAGATACATGCAAGTTCATCCATAAAATATTTTTGGTTTGCCGTAATCGGACCAAGCCACCAAAAATTGTCCCTACCCCAAAAATGTTTATATCAAGAATTCCAAAGAAAAAATGTTTTGTGCTATTTTTGCAATGAAATAGGTCTCTTTCGCAGATGTTTGAAAGAAAAATAATAATTAACCTGTCTACCTACCTACTTACTTTTAAAAAAATTATGTCAAATAAAAATTACGTCGTATTATGTCAATTTATTATTTTTAGTGATGGCCGAATGTTATTGATTTGTTGTGTTTGTACATGTACATGTAATTTGTATTTCTTAGAAATATTACATTTGATGTCTTTTACCACAGGTAATGCTGCCCACTGAAATTTCAAGACACAAATTGGTGTCTGCTTAATAAATTTCTTATATGGCTATCTTATGAGAATAAATATATTGGGTTTTTTTAGTTTGTATTAATAATACTGGTTTAATATACATACATGTATGTTATTTCTGACAGTTTCATGATCATTACATAACATAATGTTAAATATCAAACATGCCGCTGACATGGTTCTCATCATTTTCAAATATTTTGACCACATCGGTGGTGTAATGGTTGGTATGCTCGTCTTCGGTTCGGTAGATCCTAGGTTTGAGCTCCGGTCGGATCAAACGAAGAACAGGAAAATTGGGATTTTCTGTTTCTCTGCTAAGCATGCAGCATTAAGGATAAAAGAGCAAAGCCTGGTTGGCTCGGAATCAAGATAATGTGTCCGAGTGTAGCGACATGTCTACCTGGGGACTGTTGCTTCAGTGAGCTAGCACCTTAGCATGATGGTCTAGTATGGAGCGGATATCTTCTCATCGAATGTAACTTGTTCTTGCCATGATATAGCTGAAAATATTTCTCATTTGGCATTGAACAACAATCCTTCACTCAAAAATGTTGAATAAATGATAGAATTGGCACAAAGTGTGTCAATATCAGATCTTATATATCTGTTTTTCCCTAGCTCTTAATATTTTCGCTCTCAAAAATCTTTCCACTTTTAATTTGTTGAGATTCAGCGATAATGGGCTAACATATATGTACATGCCATTATTCTACTTTGGAAAGTGAATTTCCTGTTTATTCCATGGTGACTTATTTGGAAATTAACGCCAGGCAAATCATTATTTATTAGCCAATGGTAAATATTCCAACTATTTAAAATTAAGTAGAAAATAATTATAGCTATTTTTTTAGCTTTTTATTGATATGAACATTTGTTATACTTCAAGTTTA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00397	WW	WW domain	Domain	Interproscan
PF00639	Rotamase	PPIC-type PPIASE domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000297	Domain	Peptidyl-prolyl cis-trans isomerase, PpiC-type	Interproscan
IPR001202	Domain	WW domain	Interproscan
IPR023058	Conserved_site	Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site	Interproscan
IPR036020	Homologous_superfamily	WW domain superfamily	Interproscan
IPR046357	Homologous_superfamily	Peptidyl-prolyl cis-trans isomerase domain superfamily	Interproscan
IPR051370	Family	Peptidyl-prolyl cis-trans isomerase Pin1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10657	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003755	Molecular Function	peptidyl-prolyl cis-trans isomerase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09578	PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1	EC:5.2.1.8	RIG-I-like receptor signaling pathway	ko04622	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_64229-1.5 global RNA-seq network