Gene detail

Detailed information of Bpl_scaf_63690-4.12 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_63690-4.12	S-METHYL-5'-THIOADENOSINE PHOSPHORYLASE	Bpl_scaf_63690	425504	441672	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_63690-4.12

ATGTTGTGTTCAAAGGCCTTATTTTACACTGTACCACAGAGAAAAGGAATAAGAGACATCGAAAGTAATGTTGCTTCAGCTATTCACAGTTGTCGCTATATAGGAATTATTGGAGGTTCAGGCTTGTCTAAACCAGATATTTTAAAAGGTGGAGAAGAAAGAGACGTGGACACTCCTTTTGGAAAGCCATCTGATGCTTTGATATGTGGTGAAATTGCTGGTGTACCATGTGTACTTTTGTCAAGACATGGCCGAGGGCACACAATAATGCCAACTAATGTTAATTTCCGAGCTAACATATGGGCCATGAAGGAGATGGGATGTACTCATTTACTGGTAACAACAGCTTGTGGGTCATTACAGGAAGGCATGCATCCTGGAGATATTGTCATACTGGATCAATTTATTGACAGAACACAGAAAAGAATTCAGACATTTTTTGATGGAGCAGCTACATCACCAAAAGGAATATGTCACATGTCTATGGCCGACCCATTCTGTAAAAAAACTAGCAAGATGTTGCTTGACAGTGGAAAAGGTTTAGGTTTATCTATACATGAAAGCGGTACAATTCTAACTATTGAGGGTCCTAGATTTTCTTCCAGAGCTGAGAGTAAACTATGGAATTCCTGGGGAGCACATTGTGTTAATATGACAACAGTTCCTGAGGTAATATTAGCTAAAGAGCTAGGGTTGTGTTATGCCTCAATGGCACTGGTTACAGATTATGACAGTTGGAGAGAAGGAGAAGAAGGGGTAAATGTAGAAAGTGTTATGAAGATATTTAAACAAAATGCTACCAATGCTCTAAAACTTCTCTTAGATGTTATACCTAAGATAGCTAAAGAAGATTGGACCAAAACACTACAACAATATAAGAATGAAGTAGAAATGAACACTTTACTTCCACACAGTTACTAAGATGCTGTACATCTGGAAAGATTCTAATCTGTATGCTGCATCTGCGTACTTTTTACAAAATTTCTAAAAATCATGATTTTTATTATTATTGCTGTATATAGTAGAAAGCTTTGTTTAGTTATCTCAGTCCTAAAACAGTTTTATTTGTTTAGAAGTTAAAGATGAGAAAGAAACCATGTGGTCTTTGTTTTCTTCCTCAATTTATTTTCAATAGATATTTATTTTAATTTACCGGTGGATGCTAAATTTATGGCACTAAATGCTGTGATTAAACAGTTGCTTACAAAATATCAAGAATGTATTTTCTTTGCAAAAATAATGGTTCTGTATAAACTATTTTTGTGTTTTTGCATAGATCATTTATTTTTTTACATGCAACAATTTTTATTGCGGTTGTATTATGTTGTCGATGGCAAGGTGTGCCATCGTCTTAAGTTTTCAGTCTAGACACAATTTTTTCCCACAATAACTTAAGTTTGATTTGACCGTTCTTTCTTTCTAATAATTTATGAGGGGGCAAATGAGGTCAGACTTCTCAGTTTCTTTAGGATTTTATTCATATGTTTGGATTTCGGTGCAGTTTTAATTTTCTCTTGTGGTAAAGATGTGGATAATTTAAATTCCTGATTGCTGTTTGATATTTTATTCTATGTCCTAAGGGTAACAGTAATATTGGAGGGTTAAACACCTTAAACCAAAATCTTAATCAGCATCTATTGTCTGCAGGGAACTACTGTCCCTGAATTCATTTTTAACTAATCTCTCCTCAATACAAATTGAATTGGAAAAACTGGTATGGCCAAATCTGACCAATCTGATGAAATCTCTAAAAAAAATTATCTAGTAACCAGATATCTACCATAGTGATAATCACAAGAAAATATTTATTATTGTAAAAAATACATGTGATTTATGAATACACAGGGAATCTGACCAAACCAGATTTTTCACATATATGAAAGCTAGGTTGTATATCATAGGTATAAATATAGTAGAATTGTATTACGCAATCACATGTCTATGTTCTAGGCTATATATTCTGGAATTTATGAGTACCGGTATACCAATATCAATATTATATGTGTGCAGTCCAAATACTCCTATTTAGTCAAGAAAGTGGTATTTAAACAGAATATGGGAATTATCTACTGACACAAGTGATTTGTGTAATCATGACTGTAACCTTATTACACAACAGAATATGCCTGTTGTATATTTTTCCATTTAAAGGTACTGTTAATCGTCATGATTTATTCTCATACATGTACTTGTTAAAAAAATATTTACAATTTTATATTTTTG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01048	PNP_UDP_1	Phosphorylase superfamily	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000845	Domain	Nucleoside phosphorylase domain	Interproscan
IPR010044	Family	Methylthioadenosine phosphorylase (MTAP)	Interproscan
IPR018099	Conserved_site	Purine phosphorylase, family 2, conserved site	Interproscan
IPR035994	Homologous_superfamily	Nucleoside phosphorylase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42679	S-METHYL-5'-THIOADENOSINE PHOSPHORYLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0009116	Biological Process	nucleoside metabolic process	Interproscan
GO:0016763	Molecular Function	pentosyltransferase activity	Interproscan
GO:0017061	Molecular Function	S-methyl-5-thioadenosine phosphorylase activity	Interproscan
GO:0019509	Biological Process	L-methionine salvage from methylthioadenosine	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00772	mtaP, MTAP; 5'-methylthioadenosine phosphorylase	EC:2.4.2.28	Cysteine and methionine metabolism	ko00270	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_63690-4.12 global RNA-seq network