| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_62453-5.9 | XLR/SCP3/FAM9 | Bpl_scaf_62453 | 509013 | 521930 | + |
| CDS | |||||
| Bpl_scaf_62453-5.9 | |||||
| Transcript |
| Bpl_scaf_62453-5.9 |
| Protein |
| Bpl_scaf_62453-5.9 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04803 | Cor1 | Cor1/Xlr/Xmr conserved region | Coiled-coil | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR006888 | Domain | XLR/SYCP3/FAM9 domain | Interproscan |
| IPR051443 | Family | X-linked Lymphocyte-regulated/Synaptonemal Complex Protein 3 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR19368 | XLR/SCP3/FAM9 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000795 | Cellular Component | synaptonemal complex | Interproscan |
| GO:0007286 | Biological Process | spermatid development | Interproscan |
| GO:0051321 | Biological Process | meiotic cell cycle | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K19528 | SYCP3; synaptonemal complex protein 3 | - | Homologous recombination | ko03440 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_62453-5.9 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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