Gene detail

Detailed information of Bpl_scaf_61969-7.5 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_61969-7.5	ANKYRIN REPEAT PROTEIN	Bpl_scaf_61969	743523	776411	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_61969-7.5

ATGGGGAAGGAAACTGAATTACTGAAGGCTGTTAAAGAGAACGATCAACAAAAAACACAGAAAATATGTCTCTTACTGCAGAAATTACTGGTACCTGAATCATCAAAATATGATATAACAAAACTCTCCAAAGATCCATCACAACCTTCATCTTCTCCTGGGGGGAGAATAAGGGTTCATTTGGGCCACATCAATATAAATTGTCAGGAAAAGGAAACTGGGTATACACCTCTGATTATAGCTGTACTTCATGAAAATAGAGATTTAGCAGATACACTTATATTCCACTGTGCAGATGTGAATGCTGCTGATAAGAAAGGGAATACGGCTTTACATTTTGCTGTTTTTACTGGCAAAGCAGAAATTGTGGAAGTACTTCTAAAGAATGGTTCACAGGTTGATAAACAGAATAGCGATGGTAATACACCGTTGCACCTGGCGTGTCAGAGTGAAAAGGAAAGACGAGTCATGGTCATGCTCAAATTATTAAAGTATACTCCTAATGTGTTCATGAAGAATAAAGACAACAGAACCCCTTTAGATGTAGCTGCTATGTATGGCAAGAAAGATGCTGTGTCAGTTCTATTGGATCACGAAACGTCGTTGAGCTCTAATACGTCAGCAATCATTGAAGCAGCTATAAGGGGATACACAAATGTTGTGCACCTATTGCTGGATTATGGCGTTAATGTGAATAGCATAAACGATTTAAAGGAAACTGGACCTCTGCATGAGGCAACGAGGTTTTTAAGGTTTGAGTCAGCAAAAATGCTTGTCCAATACGGTGCAAGTCCGCAGCTACAAAATCCAAAATTAGAAACACCTTTGAAAATAGCGGAGAGTTTGCCACCAACGGTTAATAGCAAATTCATATTGTTGTTTAAAGAAGTGCCAAAAAGAGAATCTCTCACTCCAAAATTCCGAAACTCAGATTTATCATATTCACCATCAAAAGACATCAAAGACTATCCAGTACTGCCAACCAGATTTGATTGGACACAGAACAGTAGTTTGTATTGCAACAGTTGCACAGCAGAAAACCCAAACACCAATATTTTTGACGGCAATTTACATACATTTTGGGTGATTACTTCATCTGAATTGGCATGGGCAGTCATTGATCTACATACAGAACATACATTAACTGGTATTACAATAAATGGCTGGGACAGTAATCAAATGGTGAAAACGTTTGAACTTCAAAAAGGGGCAAGCGTACATGGACCATGGACAACTGTAGGATGTTTTGTTTGTGCACGAAATGGTAGCAAAGATCCCAAAGAGAATGGTGAACCTCAAACTTTCAAAGATTTTACTGCAAGTTCACAGTTTTGGAGATTCCATCTACTGATGAACCATGGAGCTAATTGTACATGTTTCCAGGGTCTTTCTCTACATGGTGCAGAAAATAGAATATTTACTGTCTTCCAAAGATTGGACATGAGTGATTATGCTGAAATATTCATAAGAGAAGGATTCAACACCAGCAGAAAATTGTTTTTGATGACTGAAGACTCTATCAAAAAGATTGTGTCTGATACAGAACATCAACGGATCATCAAATCTGGACTTGAAAAAGAAGCACGGAAAGATTTTCAACTAAAATTCCTGAAATGGAAACATCCCCCTCTAGAAACAGCAAAGCAATCTCAAGTACTGCCAGACATCGTTGTGAAGGGCGATCCTGGATGTAGGGAAAAGTTAAAATTGTGTTTCAAAGGAACTGATGCCGAGAATCAGAAAACGGAACAAGAAGTAGAAACCCACCTTGAAACGTTGGATGAAAATCAGCCTTCACTTGCCGTGTTTTCTGGGATAACAATATCAACATGTGGGAAATATAAATGTTTTGTACAGTCTATAGATCACCCAGACATTATATTACATGCTTCATCAGAAATACATATAGAATCATCATCCAACTTATCAGTGGAAATGCAAGAGCAATTCAGTGAAATGGAACAGATGCTCCAAGACTTGCAGACAAATATATAA

Transcript

Bpl_scaf_61969-7.5

CAAAACTATAACTTCCTAGTCGTTTCATTTACTTGACCTTGCAGTTTATATATAATTTATTGTCGTCATATACATATATACAGATAAAGTTTATTATCGATATAACGTTTCATACAATCACTTCTATTTATACTTCCCCATTGCTTCGGGTAAAACACAGTGACAAAGAAATGTGATTCCTTTACAATATAAGATGGGGAAGGAAACTGAATTACTGAAGGCTGTTAAAGAGAACGATCAACAAAAAACACAGAAAATATGTCTCTTACTGCAGAAATTACTGGTACCTGAATCATCAAAATATGATATAACAAAACTCTCCAAAGATCCATCACAACCTTCATCTTCTCCTGGGGGGAGAATAAGGGTTCATTTGGGCCACATCAATATAAATTGTCAGGAAAAGGAAACTGGGTATACACCTCTGATTATAGCTGTACTTCATGAAAATAGAGATTTAGCAGATACACTTATATTCCACTGTGCAGATGTGAATGCTGCTGATAAGAAAGGGAATACGGCTTTACATTTTGCTGTTTTTACTGGCAAAGCAGAAATTGTGGAAGTACTTCTAAAGAATGGTTCACAGGTTGATAAACAGAATAGCGATGGTAATACACCGTTGCACCTGGCGTGTCAGAGTGAAAAGGAAAGACGAGTCATGGTCATGCTCAAATTATTAAAGTATACTCCTAATGTGTTCATGAAGAATAAAGACAACAGAACCCCTTTAGATGTAGCTGCTATGTATGGCAAGAAAGATGCTGTGTCAGTTCTATTGGATCACGAAACGTCGTTGAGCTCTAATACGTCAGCAATCATTGAAGCAGCTATAAGGGGATACACAAATGTTGTGCACCTATTGCTGGATTATGGCGTTAATGTGAATAGCATAAACGATTTAAAGGAAACTGGACCTCTGCATGAGGCAACGAGGTTTTTAAGGTTTGAGTCAGCAAAAATGCTTGTCCAATACGGTGCAAGTCCGCAGCTACAAAATCCAAAATTAGAAACACCTTTGAAAATAGCGGAGAGTTTGCCACCAACGGTTAATAGCAAATTCATATTGTTGTTTAAAGAAGTGCCAAAAAGAGAATCTCTCACTCCAAAATTCCGAAACTCAGATTTATCATATTCACCATCAAAAGACATCAAAGACTATCCAGTACTGCCAACCAGATTTGATTGGACACAGAACAGTAGTTTGTATTGCAACAGTTGCACAGCAGAAAACCCAAACACCAATATTTTTGACGGCAATTTACATACATTTTGGGTGATTACTTCATCTGAATTGGCATGGGCAGTCATTGATCTACATACAGAACATACATTAACTGGTATTACAATAAATGGCTGGGACAGTAATCAAATGGTGAAAACGTTTGAACTTCAAAAAGGGGCAAGCGTACATGGACCATGGACAACTGTAGGATGTTTTGTTTGTGCACGAAATGGTAGCAAAGATCCCAAAGAGAATGGTGAACCTCAAACTTTCAAAGATTTTACTGCAAGTTCACAGTTTTGGAGATTCCATCTACTGATGAACCATGGAGCTAATTGTACATGTTTCCAGGGTCTTTCTCTACATGGTGCAGAAAATAGAATATTTACTGTCTTCCAAAGATTGGACATGAGTGATTATGCTGAAATATTCATAAGAGAAGGATTCAACACCAGCAGAAAATTGTTTTTGATGACTGAAGACTCTATCAAAAAGATTGTGTCTGATACAGAACATCAACGGATCATCAAATCTGGACTTGAAAAAGAAGCACGGAAAGATTTTCAACTAAAATTCCTGAAATGGAAACATCCCCCTCTAGAAACAGCAAAGCAATCTCAAGTACTGCCAGACATCGTTGTGAAGGGCGATCCTGGATGTAGGGAAAAGTTAAAATTGTGTTTCAAAGGAACTGATGCCGAGAATCAGAAAACGGAACAAGAAGTAGAAACCCACCTTGAAACGTTGGATGAAAATCAGCCTTCACTTGCCGTGTTTTCTGGGATAACAATATCAACATGTGGGAAATATAAATGTTTTGTACAGTCTATAGATCACCCAGACATTATATTACATGCTTCATCAGAAATACATATAGAATCATCATCCAACTTATCAGTGGAAATGCAAGAGCAATTCAGTGAAATGGAACAGATGCTCCAAGACTTGCAGACAAATATATAAATACAGTATCAAAAAGATGCTTTACCATGTGCAATCGTTAAGGGCGATATAAACTGTGACAAATCATGTGTGTTCAATAAATAAAAAAAAAATATATTGGTAC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00023	Ank	Ankyrin repeat	Repeat	Interproscan
PF00754	F5_F8_type_C	F5/8 type C domain	Domain	Interproscan
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF13637	Ank_4	Ankyrin repeats (many copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000421	Domain	Coagulation factor 5/8 C-terminal domain	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR008979	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR013761	Homologous_superfamily	Sterile alpha motif/pointed domain superfamily	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR050663	Family	Ankyrin Repeat and SOCS Box	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24193	ANKYRIN REPEAT PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000976	Molecular Function	transcription cis-regulatory region binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0045944	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for Bpl_scaf_61969-7.5 global RNA-seq network