| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_61387-2.16 | SUCCINATE DEHYDROGENASE IRON-SULFUR PROTEIN | Bpl_scaf_61387 | 217274 | 230529 | + |
| CDS | |||||
| Bpl_scaf_61387-2.16 | |||||
| Transcript |
| Bpl_scaf_61387-2.16 |
| Protein |
| Bpl_scaf_61387-2.16 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13085 | Fer2_3 | 2Fe-2S iron-sulfur cluster binding domain | Domain | Interproscan |
| PF13534 | Fer4_17 | 4Fe-4S dicluster domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001041 | Domain | 2Fe-2S ferredoxin-type iron-sulfur binding domain | Interproscan |
| IPR004489 | Family | Succinate dehydrogenase/fumarate reductase iron-sulphur protein | Interproscan |
| IPR006058 | Binding_site | 2Fe-2S ferredoxin, iron-sulphur binding site | Interproscan |
| IPR009051 | Homologous_superfamily | Alpha-helical ferredoxin | Interproscan |
| IPR012675 | Homologous_superfamily | Beta-grasp domain superfamily | Interproscan |
| IPR017896 | Domain | 4Fe-4S ferredoxin-type, iron-sulphur binding domain | Interproscan |
| IPR017900 | Conserved_site | 4Fe-4S ferredoxin, iron-sulphur binding, conserved site | Interproscan |
| IPR025192 | Domain | Succinate dehydogenase/fumarate reductase N-terminal | Interproscan |
| IPR036010 | Homologous_superfamily | 2Fe-2S ferredoxin-like superfamily | Interproscan |
| IPR050573 | Family | Succinate Dehydrogenase/Fumarate Reductase Iron-Sulfur | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11921 | SUCCINATE DEHYDROGENASE IRON-SULFUR PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0006099 | Biological Process | tricarboxylic acid cycle | Interproscan |
| GO:0009055 | Molecular Function | electron transfer activity | Interproscan |
| GO:0009060 | Biological Process | aerobic respiration | Interproscan |
| GO:0016491 | Molecular Function | oxidoreductase activity | Interproscan |
| GO:0022904 | Biological Process | respiratory electron transport chain | Interproscan |
| GO:0031966 | Cellular Component | mitochondrial membrane | Interproscan |
| GO:0051536 | Molecular Function | iron-sulfur cluster binding | Interproscan |
| GO:0051537 | Molecular Function | 2 iron, 2 sulfur cluster binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K00235 | SDHB, SDH2; succinate dehydrogenase (ubiquinone) iron-sulfur subunit | EC:1.3.5.1 | Carbon metabolism | ko01200 | PMID: 28812709 |
| Citrate cycle (TCA cycle) | ko00020 | PMID: 28812709 | |||
| Oxidative phosphorylation | ko00190 | PMID: 28812709 | |||
| Alzheimer's disease | ko05010 | PMID: 28812709 | |||
| Parkinson's disease | ko05012 | PMID: 28812709 | |||
| Huntington's disease | ko05016 | PMID: 28812709 | |||
| Non-alcoholic fatty liver disease (NAFLD) | ko04932 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_61387-2.16 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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