Gene detail

Detailed information of Bpl_scaf_59088-2.5 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_59088-2.5	PROTEIN ARGININE N-METHYLTRANSFERASE	Bpl_scaf_59088	190788	204012	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_59088-2.5

ATGTCATCTGACACAAGTCATATAAGTAAATCATCTTTATCATGTGCTAGGTCCTTTTTAGCCAAGAAAAAATATGGGAGATCCTTTGCAAATTTTTTACTTTTCATTAAACTGTCTCCTCATAAAAAGGAAGATGTTTTGGATGACTTTATACACTGCATGACAGAATGGACTAATCAGCTGGTAGCAGAGGACAGAATGGATGATTTGTTTAAGTGCTATGACCAAGCCTGTGAAATCCTTCCAGCTTGTGAATCTGTTTTGAATAATATTGGTGCTCAACTATTTAGACTTGGCTATATAGAAGAGGCAGCTCTCTATATCAGAAGATCAATTCAAATTAACCCAGACTATTCTGCAGCCAGACAAAATTTAGAAAATGTCTGCAGTCATCTTGTTGAACGCTGGCATTTTCGTATGTTGAATGATGTCAGACGTAATTGTGCCTACAAAATTGCCATTAGAAGAGCTGCACAAAGAGGTCACCGATCAATGATTGATATAGGATGTGGAACTGGGATATTAAGTTTGTTTGCCATGAAAGCTGATATTCCTGAAATCTATGCATGTGAGAAATCAAGAACAATGTTAGAGATTACACATGATGTGTTTCAGGCTAATAGAGCTGATGAGAAAATTAATCTTATTTGTAAAGCATCCACAGACCTTGAAATCCCAGAAGATATCCCTGATAGAGTATCACTAGTGGTGACAGAAACCTTGGACGCAGCTTTGTTTGGAGAGAATATCATCACCACATTACAGCATGCCTTACAGAAGTTGATTATTCCATTTGATGATGATAATGATGAGGTTGGTCCAACTGTTATACCATGTGGAGCTACTGTTTATGTTTGTCCAATTGAAAGTGAAGCTATAAGAAACAAGAACAGATTTTTATACTCAGTTTTACAGAATGTTGATTTAGAAGACATTCCAATCTACTGTACAACAGGCAGCAAGGATGATCCTTATACAACAGAGAATTTGTCAAAATTACGAGGAGGTTACAAACGGTTGTCTGATTCAACCATTCTGACTAAAGTCAACTTCACAAGTATAGAGGAATTAGACATATTAAGCAGTGGAATACAATGGGATGTTATAGTTGACTTGACAAAGTCGGGTAAACTAGATGCCATTGCTGTTTGGTTTAACCTCCATCTTGATGAAGATATCTCCATATCAACAGATCCTACCAACAAGAATTGCTGGGAACAAGCCATATTTCCTGTACTGCCATCAAACTTTTGTCATTGTCATAATGGGAAAGGATTCCAGAACAATTTCCAAGTGTATAGTGGCAACAAGGCTCAACTATGTTTTAGTTTACATGAAAACTATTTACATTTGAATTCCTGTCAAATTATAGATTCAGTAACTGACAAATGTGATGTTGAAATGGCTGACAATTGTGTACGACAAAATTATAGTGAACCCATTCTACTTGAAAGGACAGAAATTGCAAAATTAAATAATCTTGATGCCAACAGAATGTTTTGTCAAGCAATTGAAAAGCATGTGATTACAGGAGAGAGTGAAAATGTATCAATTTTGGATATAAGTTCAGAGTTATCTCCCCTTTCATTGCAATTTTTACAACTGGGAATTCCCCATGCTACCATTTTAGCCAGAAAGGAAATACATGATGATATAATTAGACTTGCTCATAGTAATGACCTTGACCTTACCACTTTGTGTATTGAAGACAATATTAAGAATATATCTGGGTTACATAATATAATGGTGTGTGATTTGATTGAGACTTGTGGAGCATTAAGACAACAGATTCTAGAAGAAATTGCATTACTCAGAGTAACAAATTTAACAAAGAACGGTAGAGTTATACCAGGGAGAGTAACAATACACGGTGTTTGTGTCGAGTCGGTTGATCTTCAGATAGATAATGCTGTAATCAGTGATGAAGTGACACTAGGTTTCAGCATTGCAAAGTTTATAAACGATTTTCAGATGACAACTCATGTTGACATTGATCTTTTAGAATTGCCTCACAGAAAGTTGTCCTTACCATTTGAATTACTGACATTTGACCTCAATGAGGAAATTTCTGAAAATCATCCTCCATCATTTTTAAAGATGGAAAATAAGGTGAAGGTCATTCCTCAGGAAACGGGTCAGGTGACTGCTGTTGTGTATTGGTTTGAATTTGAACTGTATTGTGGGATACATTTCACCACATTAGACACAATGTCACACTGGAAGCAGGCAGCAATTATGATGAAACCCTCAGACGAACCCATACTAGCAGGGCAAGAGCTGATATTAAATGTGACTTTAGAAAATAGTTGTTTGAATATCAAAATGGAATCATGA

Transcript

Bpl_scaf_59088-2.5

GTACCGGTCCCATATCTGTAATACTTGTTTTAGCTTCCTCAACATCACTGATATTTCACGATTTTTGACTTTTATTTCTAATGTTGCTTGCTGGTTAATCCGAATATTTTGAACATGTCATCTGACACAAGTCATATAAGTAAATCATCTTTATCATGTGCTAGGTCCTTTTTAGCCAAGAAAAAATATGGGAGATCCTTTGCAAATTTTTTACTTTTCATTAAACTGTCTCCTCATAAAAAGGAAGATGTTTTGGATGACTTTATACACTGCATGACAGAATGGACTAATCAGCTGGTAGCAGAGGACAGAATGGATGATTTGTTTAAGTGCTATGACCAAGCCTGTGAAATCCTTCCAGCTTGTGAATCTGTTTTGAATAATATTGGTGCTCAACTATTTAGACTTGGCTATATAGAAGAGGCAGCTCTCTATATCAGAAGATCAATTCAAATTAACCCAGACTATTCTGCAGCCAGACAAAATTTAGAAAATGTCTGCAGTCATCTTGTTGAACGCTGGCATTTTCGTATGTTGAATGATGTCAGACGTAATTGTGCCTACAAAATTGCCATTAGAAGAGCTGCACAAAGAGGTCACCGATCAATGATTGATATAGGATGTGGAACTGGGATATTAAGTTTGTTTGCCATGAAAGCTGATATTCCTGAAATCTATGCATGTGAGAAATCAAGAACAATGTTAGAGATTACACATGATGTGTTTCAGGCTAATAGAGCTGATGAGAAAATTAATCTTATTTGTAAAGCATCCACAGACCTTGAAATCCCAGAAGATATCCCTGATAGAGTATCACTAGTGGTGACAGAAACCTTGGACGCAGCTTTGTTTGGAGAGAATATCATCACCACATTACAGCATGCCTTACAGAAGTTGATTATTCCATTTGATGATGATAATGATGAGGTTGGTCCAACTGTTATACCATGTGGAGCTACTGTTTATGTTTGTCCAATTGAAAGTGAAGCTATAAGAAACAAGAACAGATTTTTATACTCAGTTTTACAGAATGTTGATTTAGAAGACATTCCAATCTACTGTACAACAGGCAGCAAGGATGATCCTTATACAACAGAGAATTTGTCAAAATTACGAGGAGGTTACAAACGGTTGTCTGATTCAACCATTCTGACTAAAGTCAACTTCACAAGTATAGAGGAATTAGACATATTAAGCAGTGGAATACAATGGGATGTTATAGTTGACTTGACAAAGTCGGGTAAACTAGATGCCATTGCTGTTTGGTTTAACCTCCATCTTGATGAAGATATCTCCATATCAACAGATCCTACCAACAAGAATTGCTGGGAACAAGCCATATTTCCTGTACTGCCATCAAACTTTTGTCATTGTCATAATGGGAAAGGATTCCAGAACAATTTCCAAGTGTATAGTGGCAACAAGGCTCAACTATGTTTTAGTTTACATGAAAACTATTTACATTTGAATTCCTGTCAAATTATAGATTCAGTAACTGACAAATGTGATGTTGAAATGGCTGACAATTGTGTACGACAAAATTATAGTGAACCCATTCTACTTGAAAGGACAGAAATTGCAAAATTAAATAATCTTGATGCCAACAGAATGTTTTGTCAAGCAATTGAAAAGCATGTGATTACAGGAGAGAGTGAAAATGTATCAATTTTGGATATAAGTTCAGAGTTATCTCCCCTTTCATTGCAATTTTTACAACTGGGAATTCCCCATGCTACCATTTTAGCCAGAAAGGAAATACATGATGATATAATTAGACTTGCTCATAGTAATGACCTTGACCTTACCACTTTGTGTATTGAAGACAATATTAAGAATATATCTGGGTTACATAATATAATGGTGTGTGATTTGATTGAGACTTGTGGAGCATTAAGACAACAGATTCTAGAAGAAATTGCATTACTCAGAGTAACAAATTTAACAAAGAACGGTAGAGTTATACCAGGGAGAGTAACAATACACGGTGTTTGTGTCGAGTCGGTTGATCTTCAGATAGATAATGCTGTAATCAGTGATGAAGTGACACTAGGTTTCAGCATTGCAAAGTTTATAAACGATTTTCAGATGACAACTCATGTTGACATTGATCTTTTAGAATTGCCTCACAGAAAGTTGTCCTTACCATTTGAATTACTGACATTTGACCTCAATGAGGAAATTTCTGAAAATCATCCTCCATCATTTTTAAAGATGGAAAATAAGGTGAAGGTCATTCCTCAGGAAACGGGTCAGGTGACTGCTGTTGTGTATTGGTTTGAATTTGAACTGTATTGTGGGATACATTTCACCACATTAGACACAATGTCACACTGGAAGCAGGCAGCAATTATGATGAAACCCTCAGACGAACCCATACTAGCAGGGCAAGAGCTGATATTAAATGTGACTTTAGAAAATAGTTGTTTGAATATCAAAATGGAATCATGA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06325	PrmA	Ribosomal protein L11 methyltransferase (PrmA)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR025799	Family	Protein arginine N-methyltransferase	Interproscan
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11006	PROTEIN ARGININE N-METHYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0016274	Molecular Function	protein-arginine N-methyltransferase activity	Interproscan
GO:0018216	Biological Process	peptidyl-arginine methylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K19737	PRMT9; type II protein arginine methyltransferase	EC:2.1.1.320	Chromosome and associated proteins	ko03036	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_59088-2.5 global RNA-seq network