Gene detail

Detailed information of Bpl_scaf_58266-9.7 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_58266-9.7	TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED	Bpl_scaf_58266	956411	982781	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_58266-9.7

GTACTTGTGGGTTATGGGAGAAATAATGACGTCATGATTTAGCAAGTCGGAACAAAAGATGAGCCGCCACAAAATATTTTGAAGAGATGCGCCGTGCTTTGAACAATTTACATGTTCAGCCTAATTCATCATTCATCCAAAGACCTGCATCCATTATAAGCCATGTCTAAGAACCGCTGCAATTGCTGCCAAAATGAAATATCTGGGTTCAGAGTACAATGTACTGAATGTACAGATTTTGACCTTTGTTTACAGTGTTACTCACTTGGTGCTGAAATTGGAAGTCACAAGCGTTTTCATGAGTACAGGTTGACGAGCGACTATGTTGTTGGAGCATTTGAGTTAGATACACCATGGAACATAGCAGAAGAAACGATGCTTCTAGATGCAGTTGAACAGGAGGACGTGGCTAACCATGTGGAAAAAAGATCAGCTGAAGTAACAATAAGGCCAGATACAGCTGATGCAATTAAAGACCACACATGTCCCAATGGGGGTCCTTTGTCTCCTAGTATTACAGAACCCATAAGTCCAATAGAACTGAGTCTTCCTGAACAACAAGAGCTGGGTTACATGCCACTAAGGGATGACTTTGAAAGAGTAACGGTAAAACTTTCACAAGTAGAAAAATACAGAACCCGATTAAAAGAACGGGAAAGACGAAAACGACTTGCAAGAGGATACAATCTTATACAAACAGCGACAACAATAGGAAAACAAAAATTTCAAACACCAAAGAAAAGAATTCATAAAGAAGAAAGAGAATTTCAAGATAAATTGAAGGTTTTTGCACAGTTCCATACCCTGTCTGAACATGAAATAATGTTAGAAAATCTACAGAAAGAAAAAGATCTAAAGGAAAGAATACAAGAATTAATGAAATACAGAAAACATGGCATAACTAAATTAGATGATATTGATGTATTTGAAGATGAAAAGTACAAAAGAGATAAAAAGAAAGAGAATAAAAAGAAAATGGGAAATATCACACCACTATCAAAAAGAAGTTTAATGGCTTCAAAAAAGGCCGCCGCCGCTACAGAAGAAAAATTAGATATACTTATAGACGAAGACGAATTAAGAGATGAAAATATTGAAAATATTCCTAAAGAGGCATGTAATATGTCAGGTTACAGCTTGTTGTCAGACAGGGAAAGAAAGGTAAATATTCCTAAAGAGGCATGTAATATGTTGGGTTACAGCTTGTCAGACAGGGAAAGAAAGGTAAATATTCCTAAAGAGGCATGTAATATGTCGGGTTACAGCTTGTTGTCAGACAGGGAAAGAAAGGTAAATATTCCTAAAGAGGCATGTAATATGTCAGGTTACAGCTTGTCAGACAGGGAAAGAAAGGTAAATATTCCTAAAGAGGCATGTAATATGTCGGGTTACAGCTTGTTGTCAGACAGGGAAAGGAAGGTAAATATTCCTAAAGAGGCATGTAATATGTCAGGTTACAGCTTGTTGTCAGACAGCGAAAGAAAGGTAAATATTCCTAAAGAGGAATGTAATATGTCGGGTTACAGCTTATTGTCAGACAGGGAAAGAAAGTTAAATATTCCTAAATAGGCATGTAATATGTCAGGTTACAGCTTGTTGTCAGACAGGGAAAGAAAGGTAAATATTCCTAAAGAGACGTAATATGTCAGGTTACAGCTTGTTATCAGACAGGGAAAGAAAGGTAAATATTTCTAAAGAGGCATGTAATATGTCAGGTTACAGCTTGTTGTCAGACAGGGAAAGAAAGGTAAATATTCCTAAAGAGACGTAATATGTCAGGTTACAGCTTGTTGTCAGACAGGGAAAGAAAGGTAAATATTCCTAAATAGGCATGTAATATGTCAGGTTACAGCTTGTTGTCAGGGAAAGAAAGGTAAATATTCCTAAAGAGGCATGTAATATGTCAGGTTACAGCTTGTTGTCAGACAGGGAAAGAAAGCTTTGCAACTCTATTGGAATGACATTTGCTAATTATATGACAATCAAGACTTGCATAATAAAGGTAAAGTATATAAACAGTAGAAAAGTTTGTATAATGCTAGGTAAAAATACATTAATACTAGTATATATATGAAGACAAGTTATAAGAATGTGAAGGAAACACTTTCTCCATTGAATAGGGTAATGATTGGTTTTATGTATACTCTTCAGTATTACACTTCAGTGGTTTTGGCATTTGTTTGTTACATTTTGTTACTTTTACCCCCAAAATTAATTCCAAAGGGTCAACATGACCCATGTTGACTCTTTGGAATTAATTTTGGGGGTAAAAATAAATTTCTTGGGGTATTGTAAATTTGATTGTTTGATTGTATTGTTATTTTGCTGGAGGACTGCCACCAAGATAATAGTCTAGACAACTCTTAATTGTTTTGACCATGGCAGTAACTGCAGGCTTCATCTCATCAAACTTTTCATTGACAGGTTTTATTAGCACTTCACTCTGTTTTTAGTTCACCTGAAATTTGTAGTTAAGATGTCCTTTTCTTATTTTGATATCTGATATGAAGAAAGTGCTAACAAGGTGTTCAGATAGATATATCAGTAAACTAATATAATTCAGGCTGCAGGGATTATAACTGAGGTAGTCGGAGGGGTGGGGGAAGGATTTCTTTGATATTCTTATTAAATTTTTCTTTCCTTGTTTTTAGGATTATCTACAGAGAAGGCAAGGAGTACCTATAAAGATCCGCTACCCAAGTGGACTAGACAAGACTCATCGTAGACAGATTATAAGTTTCCTGACTGACAATGGTTGGATTGGAGTTACTTGAGAGAGAGTAAAGAAAGAGAACAGGCTTCTTTGTATTGTACTAACCACAGTAGTATATACATGTAGATAGAAATGTCAGGTATATACCTACTTGTCAGAGCTGATTTATACCAGGCATCTACAAATAGGGGTTGTCGCTGCAATAACTTCTAATAAGAGATGGGATATATTGTAGTTATATTCAAGTCGGAGCAAATACCGTCCATTATAGTATTTACTGAATTCACTTGATTTGTAACTATGACTTGGTCAACAAATAAACATTTGAGATTAAGTAAATTGCTGATTTGCAAAATGAAGGTACAAGATCTGTATTTTGCATTTAAATTGTGTTCAGGGGGTGGGGTGTATCTTCATTTCTTAATCTCATTACACAGACAATCACAACAGTTCATCAATCATGGGTGGTCGAAACTGCAACATGGTATATATGTATATATATATGCCAGGGAATTTATTCTATTTAAGTGAAAACCTTATGTATGACTAAATATGGCAGTGTTTTCTACACTGTAATTTTTTTTCTTCAGTTTTTTTATAGTGGAAAAATGTGATAAGACATACTTGTGATGATCATTATCATAATATATTTTGTTGCAGTTAAATATAGAATCAAACAGGATTTTTTTTTTTTTTTTTTTTTCATAAATGAAGTTTTAATTCATTTGATTTGTCATAGGTAGAAGAAGTATAAAGACAATACGAGTCTACTGTGACTACAGAAAGCATGTTATACACCACAACTAACAATTTATTCTCTTAACAATAACATATGATTTAAATAATTGATTATTTTGTTTCACGATGAAGGTAAAGGATATTTACAGTATCTCAATTTTCATCTTCGAAATTTATGTTACAAATTACCCCAAATTTATGATTTGTATTTTTTTTAATAATTTTTTGGCTGTATTAAATTCTATTTTGTATCTTTTTGTAATTTTTGGCTGTATAAAATTCTAGTCCAGGAGATATATTATATTTTTGTTCTGTGTATAAAGATACAGTTAATTATTTAAATTTTGTGTTATTTTTTGTTGTAAACCTTGTGCAGGGGAGGTAATTTATTTAGAGATTATTTATGTCATTAATTGTATTTTATTTATTTATTTTATTATTATTTGGCCGTTTTATTTACTGATGTTTTATGTTACGGATTTAAAACACATATTTTTATTTTGCAAGGAAATCTTGTAAAAATCATGACAGAGGAAACTGTCAATAGATAGTATTTTCTCTCTGTCTTAAAAAGTAAAGCTGTTATCATGAAGTCAAGTGTACATACATTTTTATCTATATCCATTATATTGAAAATGCTCTTCGCGATGTTTTCCTTTTGAATGAAACAACTGAATCCTAAATAAACCTGTGTTTACCAACAAGACAGGCAGTCGCATTTCCATTTTAAAATGTTTCAAAAATATGTTAGGAAGTTAGTCATAATATCAATATTAAAATTTGCGACTTTTTAGCTTGATGGAATAATTTTTTCACAAGCAATTTTTTTCTATAGACTATTTCACATGTGCAATGATATACTATGCATTTAAACTCAATTCCATGTTTCATTCACTTGATATTTAAGGACCACTTCTCATGAGATTTCTTCTTGACA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00569	ZZ	Zinc finger, ZZ type	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000433	Domain	Zinc finger, ZZ-type	Interproscan
IPR041983	Domain	ADA2-like, zinc finger, ZZ-type	Interproscan
IPR043145	Homologous_superfamily	Zinc finger, ZZ-type superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12374	TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003682	Molecular Function	chromatin binding	Interproscan
GO:0003713	Molecular Function	transcription coactivator activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006338	Biological Process	chromatin remodeling	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0070461	Cellular Component	SAGA-type complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15127	TADA2B; transcriptional adapter 2-beta	-	Transcription machinery	ko03021	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_58266-9.7 global RNA-seq network