| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_57954-5.26 | ATAXIA TELANGIECTASIA MUTATED ATM -RELATED | Bpl_scaf_57954 | 491193 | 607849 | - |
| CDS | |||||
| Bpl_scaf_57954-5.26 | |||||
| Transcript |
| Bpl_scaf_57954-5.26 |
| Protein |
| Bpl_scaf_57954-5.26 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00454 | PI3_PI4_kinase | Phosphatidylinositol 3- and 4-kinase | Family | Interproscan |
| PF02260 | FATC | FATC domain | Family | Interproscan |
| PF15785 | SMG1 | Serine/threonine-protein kinase smg-1 | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000403 | Domain | Phosphatidylinositol 3-/4-kinase, catalytic domain | Interproscan |
| IPR003152 | Domain | FATC domain | Interproscan |
| IPR011009 | Homologous_superfamily | Protein kinase-like domain superfamily | Interproscan |
| IPR014009 | Domain | PIK-related kinase | Interproscan |
| IPR016024 | Homologous_superfamily | Armadillo-type fold | Interproscan |
| IPR018936 | Conserved_site | Phosphatidylinositol 3/4-kinase, conserved site | Interproscan |
| IPR031559 | Family | Serine/threonine-protein kinase SMG1 | Interproscan |
| IPR036940 | Homologous_superfamily | Phosphatidylinositol 3-/4-kinase, catalytic domain superfamily | Interproscan |
| IPR039414 | Domain | SMG1, PIKK catalytic domain | Interproscan |
| IPR050517 | Family | DNA Damage Response and Repair Kinase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11139 | ATAXIA TELANGIECTASIA MUTATED ATM -RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000184 | Biological Process | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Interproscan |
| GO:0004674 | Molecular Function | protein serine/threonine kinase activity | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006468 | Biological Process | protein phosphorylation | Interproscan |
| GO:0016301 | Molecular Function | kinase activity | Interproscan |
| GO:0016310 | Biological Process | phosphorylation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K08873 | SMG1; serine/threonine-protein kinase SMG1 | EC:2.7.11.1 | mRNA surveillance pathway | ko03015 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_57954-5.26 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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