| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_57424-1.10 | PYM PROTEIN | Bpl_scaf_57424 | 170086 | 180124 | - |
| CDS | |||||
| Bpl_scaf_57424-1.10 | |||||
| Transcript |
| Bpl_scaf_57424-1.10 |
| Protein |
| Bpl_scaf_57424-1.10 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF09282 | Mago-bind | Mago binding | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR015362 | Domain | WIBG, Mago-binding | Interproscan |
| IPR036348 | Homologous_superfamily | WIBG, N-terminal domain superfamily | Interproscan |
| IPR039333 | Family | Partner of Y14 and mago | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22959 | PYM PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0035145 | Cellular Component | exon-exon junction complex | Interproscan |
| GO:1903259 | Biological Process | exon-exon junction complex disassembly | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K14294 | WIBG, PYM; partner of Y14 and mago | - | RNA transport | ko03013 | PMID: 28812709 |
| mRNA surveillance pathway | ko03015 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_57424-1.10 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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