Detailed information of Bpl_scaf_57006-1.28 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_57006-1.28RIBONUCLEASE P PROTEIN SUBUNIT P40Bpl_scaf_5700698980110609-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08584Ribonuc_P_40Ribonuclease P 40kDa (Rpp40) subunitFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR013893FamilyRibonuclease P protein subunit Rpp40Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR15396RIBONUCLEASE P PROTEIN SUBUNIT P40Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000171Molecular Functionribonuclease MRP activityInterproscan
GO:0000172Cellular Componentribonuclease MRP complexInterproscan
GO:0000447Biological Processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0001682Biological ProcesstRNA 5'-leader removalInterproscan
GO:0004526Molecular Functionribonuclease P activityInterproscan
GO:0030677Cellular Componentribonuclease P complexInterproscan
GO:0030681Cellular Componentmultimeric ribonuclease P complexInterproscan
GO:1905267Biological Processobsolete endonucleolytic cleavage involved in tRNA processingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14530RPP40; ribonucleases P/MRP protein subunit RPP40EC:3.1.26.5
RNA transport ko03013PMID: 28812709
Ribosome biogenesis in eukaryotes ko03008PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_57006-1.28 global RNA-seq network
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