Gene detail

Detailed information of Bpl_scaf_56777-2.25 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_56777-2.25	ACTIVATOR OF S-PHASE KINASE-RELATED	Bpl_scaf_56777	274571	281797	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_56777-2.25

ATGAGCTCGTATGATTCGAAATATGCTAAAAGGAAACTGAATTTCCATGACAAACCATTTTACTGCAAATCTGTTTATATCGACATTAAAGCAGAAACCGCGAGGAGGAAGATAGTAAGACGAATTAAAGATCTAGGAGGAACTGTTGAAGGCTTTCTATCAAAAGACATTGATTTATTTATCACTGACAAGAAAAATGGAGATCTTTCAACAACTTGTAAAGAAGAAAAAACTAAATCCATACAGATTTCAAGCAATCTCAGTAGAGGTCGAGCTCTGTTGATGAAAGCTAATGCCACATCTAAAAATAGAAGAGGGTCAACAAATGGAAATGATATTGTACAGAATGCAGTCAATCTTGGTGTAAAGGTCCAGCAAATTAATATCTTTCTTAAAGAATCAAACAAATATGTAAATTGTTTGAAGAAAGTTGTGAAAAAGGCAAAAAATGGCATTGATGGAATCACTCCATTGACGTGGACAGATAATGATAAAGAAAACAAATGCTGCATCAAAGTTGAAGATACAGAACAGTTATACAAACCCCTGTTAAAACATTTTGATACATTCCCCAATTTAATTTACAGTGATGAAGTAGCATCTCCTTTTGTTAAAGGTGTTGTCCTGACAAAACAAACAGAGAAAAATATTAATAGATATTCAACGGCCAAGAAAACAGTACCAGTATCCAATAAAGGAGGCTATTGTGAAGCATGTGATTATTGGTATAGATGTTCTTTAAGGGAACATATCAAAAGTGCAAAGCATGAAAAATTTGTCAAAGATCAAACAAATTTCCAACACTTAGATGATGTTATAAACAAATTGCCATCACTGTCTGATTTTCTTTTGAAATTGGAAGATCTTACAGAAAAGGTGAAGTTATCTTTTCAGATACAACATGATACAATATCTGATCAATATAAGGGAGATATATCTTGTATAGAGAAGAATAGTGATGAAATGCCATCATTAGATAAGGAATTAACAGTTGACCGTAATATAGAACAGAAAGAACACAAGGAACAAATACAAAATATGACAAGGGACATTGAAATTCCATCTTTAGTTAGGGAACTCCCGAATTCCGGAATGGAACAACTTCCTAATGAACATATCGTAACAGAAATGTCATCGTGCATTGGTCAGAGAATTGAAACACTTGGGAGTGAAATGCCGTCACTCCTCAAAGAAAAGCTGTATGACACCAACACACAAGACTCTGGAACTGGACCTGAATTACTAGGCAATGAATGTGTTTTAAACTCAACATGTAATTCTAATCATAGTATTAACAACGAGAGCAAAATTAAACGATTAAACAGTGATTCTGCTATAACACCCGATGATATTATTCCTGTATGCAGAGCAACACAGATTAATATTGATTGTACAGATGATAATGCTGTGTTTGTAGATGATCTCAGTCAACAATCTACTAATGTTCTGCTACAAAATATCACGACTCATGTACGCAGACAATTTTCTCAAATATCCTTTGTTGAGAATAAACTAGAAACATCAGAAAATAGTGAAACCATGTCATATTCTCACGGAAATTATTGTTCAGGAAATAACATGGTAAACTTTAACACAGTGATCTCCCAAAATAAGAAAAGAAACATGTGCTCATACGACTTTTCTTCTTCACCTAATTCTAAAAGTCAGCATCAGTTTAATTTCAAAGATCTGGCTTCCAACTGGATAAAGGATATGGGAAACACATTTATCGACTACCAAGAGATGACAAAAAATGAACAGGAGAAAACAATTACTGAGGATATGAACTGTGATTATTCTGGATCTACTGAAGAATTGAATCCTGAAGACTACAAACAGTTTATTTCACAAGAAAAATGTTGTACGGAGTCAGACTATACCGGTCACAAAGTAAATGTACATAGTGATAGAATTGAAGATCGTAACTTCTTTGAATCTGCAAAAGACATGAAGTATGAAAAATGGCAGTGTTTAGTTAGCATGCATCCTAATTCAGATTTGCTTGGAATTGAAAGCATGTCTACGCAACAAAATGATGAATGGTATGTGAACTTGTGTGAGAATAGCAATTCAGTTGAAAGTATATCATTGTTATCTATGCCAGATACCCCAAATATATGTACAAGGACATTTTCAAAAGTGTCAGATTATGGATTATCAAAAAATTCAAGTTCACTCCAATCTTTGCCATATAAACCAGATAATATTTTGTGTAGCAGTGAATCTAACAACAGTGATTTCAGTGTTATTTCAGAAAGAACTCCATTCAGCCAGAGAAAAATGAAAACATGTACATTTGACCTTAATTCTGAAAACTTCACTAGTTCTAGTAAACAAGAACCAATCAAAATTAAGATTAATTTAAGTGACATAAAGAAAAAAGAAAAGAAAAAAAAGAGGAAAGTAAAGGTAAAAAGAAGAATATTTCCTGAAGTTATTGATCATGAAGAGAAGGAAAATAATCAGGACCAATCATTTTACCAGACACAACAACAAGGTGAAATGAAGATAAAGCTGTGTAAAGTTGTTAAAACACCTAGTCAGAAGAATGGCAATTTAATGACATATTGGAAAGTAAGAAAAAGTGGAGGGTGTCGTCTCGTCTTCAGCTCAGAGAAAAGAAAAGCTAAAGATACAGGACATAACGATGTGATATCAAAGAGGAGGAAATGTATATTGTAA

Transcript

Bpl_scaf_56777-2.25

CGGGCATTGTGAAAACAGCTGAAGATCATATAAAGACACTCAAGGAAAAGTTGTATTTGTAAACTTTCCGCTTTAGGAGACGTGTATATTGTAGTTATGAAGTGAAAAAATAACATTAAGACCATACTTTTTGCGACTCAGCAAGTTGGGTAAATTTTTATCAAGAGAATGAGCTCGTATGATTCGAAATATGCTAAAAGGAAACTGAATTTCCATGACAAACCATTTTACTGCAAATCTGTTTATATCGACATTAAAGCAGAAACCGCGAGGAGGAAGATAGTAAGACGAATTAAAGATCTAGGAGGAACTGTTGAAGGCTTTCTATCAAAAGACATTGATTTATTTATCACTGACAAGAAAAATGGAGATCTTTCAACAACTTGTAAAGAAGAAAAAACTAAATCCATACAGATTTCAAGCAATCTCAGTAGAGGTCGAGCTCTGTTGATGAAAGCTAATGCCACATCTAAAAATAGAAGAGGGTCAACAAATGGAAATGATATTGTACAGAATGCAGTCAATCTTGGTGTAAAGGTCCAGCAAATTAATATCTTTCTTAAAGAATCAAACAAATATGTAAATTGTTTGAAGAAAGTTGTGAAAAAGGCAAAAAATGGCATTGATGGAATCACTCCATTGACGTGGACAGATAATGATAAAGAAAACAAATGCTGCATCAAAGTTGAAGATACAGAACAGTTATACAAACCCCTGTTAAAACATTTTGATACATTCCCCAATTTAATTTACAGTGATGAAGTAGCATCTCCTTTTGTTAAAGGTGTTGTCCTGACAAAACAAACAGAGAAAAATATTAATAGATATTCAACGGCCAAGAAAACAGTACCAGTATCCAATAAAGGAGGCTATTGTGAAGCATGTGATTATTGGTATAGATGTTCTTTAAGGGAACATATCAAAAGTGCAAAGCATGAAAAATTTGTCAAAGATCAAACAAATTTCCAACACTTAGATGATGTTATAAACAAATTGCCATCACTGTCTGATTTTCTTTTGAAATTGGAAGATCTTACAGAAAAGGTGAAGTTATCTTTTCAGATACAACATGATACAATATCTGATCAATATAAGGGAGATATATCTTGTATAGAGAAGAATAGTGATGAAATGCCATCATTAGATAAGGAATTAACAGTTGACCGTAATATAGAACAGAAAGAACACAAGGAACAAATACAAAATATGACAAGGGACATTGAAATTCCATCTTTAGTTAGGGAACTCCCGAATTCCGGAATGGAACAACTTCCTAATGAACATATCGTAACAGAAATGTCATCGTGCATTGGTCAGAGAATTGAAACACTTGGGAGTGAAATGCCGTCACTCCTCAAAGAAAAGCTGTATGACACCAACACACAAGACTCTGGAACTGGACCTGAATTACTAGGCAATGAATGTGTTTTAAACTCAACATGTAATTCTAATCATAGTATTAACAACGAGAGCAAAATTAAACGATTAAACAGTGATTCTGCTATAACACCCGATGATATTATTCCTGTATGCAGAGCAACACAGATTAATATTGATTGTACAGATGATAATGCTGTGTTTGTAGATGATCTCAGTCAACAATCTACTAATGTTCTGCTACAAAATATCACGACTCATGTACGCAGACAATTTTCTCAAATATCCTTTGTTGAGAATAAACTAGAAACATCAGAAAATAGTGAAACCATGTCATATTCTCACGGAAATTATTGTTCAGGAAATAACATGGTAAACTTTAACACAGTGATCTCCCAAAATAAGAAAAGAAACATGTGCTCATACGACTTTTCTTCTTCACCTAATTCTAAAAGTCAGCATCAGTTTAATTTCAAAGATCTGGCTTCCAACTGGATAAAGGATATGGGAAACACATTTATCGACTACCAAGAGATGACAAAAAATGAACAGGAGAAAACAATTACTGAGGATATGAACTGTGATTATTCTGGATCTACTGAAGAATTGAATCCTGAAGACTACAAACAGTTTATTTCACAAGAAAAATGTTGTACGGAGTCAGACTATACCGGTCACAAAGTAAATGTACATAGTGATAGAATTGAAGATCGTAACTTCTTTGAATCTGCAAAAGACATGAAGTATGAAAAATGGCAGTGTTTAGTTAGCATGCATCCTAATTCAGATTTGCTTGGAATTGAAAGCATGTCTACGCAACAAAATGATGAATGGTATGTGAACTTGTGTGAGAATAGCAATTCAGTTGAAAGTATATCATTGTTATCTATGCCAGATACCCCAAATATATGTACAAGGACATTTTCAAAAGTGTCAGATTATGGATTATCAAAAAATTCAAGTTCACTCCAATCTTTGCCATATAAACCAGATAATATTTTGTGTAGCAGTGAATCTAACAACAGTGATTTCAGTGTTATTTCAGAAAGAACTCCATTCAGCCAGAGAAAAATGAAAACATGTACATTTGACCTTAATTCTGAAAACTTCACTAGTTCTAGTAAACAAGAACCAATCAAAATTAAGATTAATTTAAGTGACATAAAGAAAAAAGAAAAGAAAAAAAAGAGGAAAGTAAAGGTAAAAAGAAGAATATTTCCTGAAGTTATTGATCATGAAGAGAAGGAAAATAATCAGGACCAATCATTTTACCAGACACAACAACAAGGTGAAATGAAGATAAAGCTGTGTAAAGTTGTTAAAACACCTAGTCAGAAGAATGGCAATTTAATGACATATTGGAAAGTAAGAAAAAGTGGAGGGTGTCGTCTCGTCTTCAGCTCAGAGAAAAGAAAAGCTAAAGATACAGGACATAACGATGTGATATCAAAGAGGAGGAAATGTATATTGTAATAATGTCCTTCATCACACACATTATTTATGATATCAAATTATTAATTTTACACAATGTTGTCACAGTGACCAACATTATTTATTGTATAACATTATCAATTTTACACAATGTTGTCACAGTGACACACATTATTTATTGTATCACATTATCAATTTTACACAATGTTGTCACAGGG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00533	BRCT	BRCA1 C Terminus (BRCT) domain	Family	Interproscan
PF07535	zf-DBF	DBF zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001357	Domain	BRCT domain	Interproscan
IPR006572	Domain	Zinc finger, DBF-type	Interproscan
IPR038545	Homologous_superfamily	DBF-type zinc finger superfamily	Interproscan
IPR051590	Family	DNA Replication Regulatory Kinase Subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15375	ACTIVATOR OF S-PHASE KINASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0010571	Biological Process	positive regulation of nuclear cell cycle DNA replication	Interproscan
GO:0031431	Cellular Component	Dbf4-dependent protein kinase complex	Interproscan
GO:0043539	Molecular Function	protein serine/threonine kinase activator activity	Interproscan
GO:1901987	Biological Process	regulation of cell cycle phase transition	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06629	ASK, DBF4; activator of S phase kinase	-	Cell cycle	ko04110	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_56777-2.25 global RNA-seq network