Gene detail

Detailed information of Bpl_scaf_5670-4.24 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_5670-4.24	SERINE/THREONINE-PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT B	Bpl_scaf_5670	486846	513102	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_5670-4.24

ATGCAAGGAGAAGGACAAACAGACATTGTTATAGAAAATCATGAATTTAAAGTTCCTATGAAAGAACTGAGCCGTGCTGAACATATTCCTGATTGGGAGAAATCCATTGCATACAGAGATTTGACTGGTTTTGTTTTAGCTATTAATGAAGCAATAAAAGGGAAAAAACTCACAGAAGAACATTTAGTGTCAGAGGTAGTCCAGAAGCTGTCTGCTTTATTAGATAAGTTATTACAATGGATAGAAGAAATACCTCCTACAGATCAACCACAAAGATTTGGTAACAAGGCCTTCAGAGATTTCTACAAAAAATTGAAAGATAATGCAGAAGAAGAGTTGAAGGTCATATTAGATGAGAAGTTTCATAAAGCCATCCCCGAGATCTCTGTTTACTTAATAGAAGGTGTTGGTAATGATACCAGAATAGATTATGGTACAGGTCATGAACTGTGTTTTGTTGCCTTTTTATGCTGTTTGTTTAAGATAGGAGTGCTTACAGAGCAGGATGCTGTGGCTGTAGCTTTTAATATATTTGAGAAATATTTAAAATTAGTACGGAAACTTCAATTAACGTACAGAATGGAACCAGCAGGCAGTCAGGGTGTGTGGAGCTTAGATGACTTCCAGTTTATCTCCTTTATATGGGGAAGTTCACAACTTATAGGTCATAAGAGAATTTTACCAAAATCTTTCATTAGACCAGAAATAGTTGAAGGATTTTCTAAAGATTATATGTTCTTAGGATGTATACAATATATTAACCAGGTAAAAACAGGTCCATTCGCTGAACATTCAAACCAGTTATGGAACATAAGTGCAGTGCCTCACTGGGAGAAAGTCAATTCTGGATTAATCAAAATGTATAAAGCTGAGGTATTGGCCAAATGGCCTGTTATTCAACATTTCCTGTTTGGTAGTTTGTTGCCATACAGTCCTGCTGATGGATAAACAATGATTAATAAGATAAACAACAATTACAAATAGACTGAATATAACAGTTCACCAAATATTGCTTAATGAAGCTTCAAAATCATGTATACCATATACGAGACAAAAACTGTTAAAAAAAAAAAAAGATGCCCAAAAAAAATTCAGTGTTCAGCTTTATCAGTCATGTTGTCTTCCCAAAGCAAAGGGTCCTGTGTTTATAAAACTGTTTGTGGTACTAACTGGTATGGACACTTTGTGGACATTTGTGATCCATGCCTTTGAAAGATTAAGACCAAATAAAATTATACCTCTGTTTCCTGTTACACGCCAGAAAAAATATGGGTAGGTAGGTAGGGATTTTTTTTTTTTTTTTAATGAAGGAATGAATGATACCGTGATACCGTAACACCAATTGTAATCACAGGGTCCTGTAAAAGTGCTAAAATGATTAAAGCTATATTTTATCTATTAAAGAACACTCGATACAGTCAAAGACGCTCTAATGGAACATTGAAAGTCATCATAAAGAACCATATTGTCTTGCTACAATAGGTTTTTTCCCATCATTTTCACATTCTTCATACAGAGGTAGGACAGTTTTATACACTTTCTTCAGTTCAGGTTTCGGGTCAGCACCAGAGTGACCACAATGAGCACAGACATCACATCATGAGTTCTAAGGCACTTACAGTCTGTCTTGTTGCTTTCTCAGCTGTTTGCTCCACTACCTTAGCCACTAACTCCTGAAGGAATTCTTCCTGTATTTCACACTCAAAATATAAGTATCTCATTCTGAAGTCACGATTGATCTCTGCGATCGTAAGGCTAGGATTGACACTAAAATTATTTTTAGGATTGTCGTCCGCCGATGTTTTTACAACAACGTTGTATTTTTTTTGGCAACACCTCGTGTTCTGATTCAAAGACTTCTCCCAGTGCGATCTTCCACGGTCCTAAGTACTGACTTCTCTTCTATGTGGTCACATTTTCGAAATCTGAGGGCAAACAGGCTGCCCACCGACAGCATGTGGGCTGCCATTTTGTTAATTTGACCTTGTACGCATGTACCAGAAGTTGTATTGCAAATTCCGGGACATGCTTTATTCACCTTACAATTTTTTTTCGGTCAGTCAGCGATTAAAAAAAAAATTTCACCAAAATTTAGCCCAGTTGGGGGGTCCAGACATGAGTCGGTCAGGTAACAGTAAACAGAGGTATAATTTTATTACGTAATCTCTGATTCATTCCTTAAGTTATGTATTGTATAACTCTCTACTACTGGTTATTATTTTGACAGAGCACAGCAGTGTACTCATTGGCTAGATTGTAGCTTATATTGTGGTAGAACACAGCAGTGTACTCGTTGGTTAGATTGTAGCTTATATTGTGGTAGAACACAGCAGTGTACTCGTTGGTTAGATTGTAGCTTATTGACTGTATCTTTAGGTAGTTGGTTAGATTGTAGCTTATTGACTGTATCTTTAGGTAGGGAGTGAACAAACAGTATAGCAGATTTTGACAGAATATAGATTCTTGAGAGATTCCAACAAACATCTGATCTTATTTAGACTGGAAAAAAATAATTGTGAAAAAAAATAACCTTGCAGTATTTTGTGTGGTTATAAAGATCTTTTGTTAAATATTTACAATAAATTCTTATAACAATATTTTGTACTATTTTGGTTGATATTACCTATAGCTGTTTGTAGGAGGGCTCATGTCTTATTTATGTTATTTATGTTTGTTTGTGTAGTGTCCATCACATATTGGGGCCGTGATTGTATGGTAGTTGGATTTACAACTACCTGTGCAATCAGTACCTATCACCACTATGGTTCTGAGTACGAACCCCATTTGTGGCGAGGTGTACTCGATACATTATGTGATAAAGTTTTTCAGTGACTTGCAACAGGTCTGTGGTTTTCTCCGGTTACTACGGTTTCTTCCATCAATAAAACTGACCTCCACGATATAACTGAAATATTGTTGAAAGTGGTATTAAACACCATAAACCAAAC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03095	PTPA	Phosphotyrosyl phosphate activator (PTPA) protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004327	Family	Phosphotyrosyl phosphatase activator, PTPA	Interproscan
IPR037218	Homologous_superfamily	PTPA superfamily	Interproscan
IPR043170	Homologous_superfamily	Phosphotyrosyl phosphatase activator, C-terminal lid domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10012	SERINE/THREONINE-PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT B	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000159	Cellular Component	protein phosphatase type 2A complex	Interproscan
GO:0003755	Molecular Function	peptidyl-prolyl cis-trans isomerase activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0007052	Biological Process	mitotic spindle organization	Interproscan
GO:0008160	Molecular Function	protein tyrosine phosphatase activator activity	Interproscan
GO:0019211	Molecular Function	phosphatase activator activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K17605	PPP2R4, PTPA; serine/threonine-protein phosphatase 2A activator	-	Insulin resistance	ko04931	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_5670-4.24 global RNA-seq network