| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_56674-1.7 | CELL CYCLE CHECKPOINT PROTEIN RAD1 | Bpl_scaf_56674 | 157933 | 174131 | + |
| CDS | |||||
| Bpl_scaf_56674-1.7 | |||||
| Transcript |
| Bpl_scaf_56674-1.7 |
| Protein |
| Bpl_scaf_56674-1.7 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02144 | Rad1 | Repair protein Rad1/Rec1/Rad17 | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003011 | Family | Cell cycle checkpoint protein, Rad1 | Interproscan |
| IPR003021 | Family | Rad1/Rec1/Rad17 | Interproscan |
| IPR046938 | Homologous_superfamily | DNA clamp superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10870 | CELL CYCLE CHECKPOINT PROTEIN RAD1 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000077 | Biological Process | DNA damage checkpoint signaling | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006281 | Biological Process | DNA repair | Interproscan |
| GO:0008408 | Molecular Function | 3'-5' exonuclease activity | Interproscan |
| GO:0030896 | Cellular Component | checkpoint clamp complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K02830 | HRAD1, RAD17; cell cycle checkpoint protein | EC:3.1.11.2 | Cell cycle - yeast | ko04111 | PMID: 28812709 |
| Meiosis - yeast | ko04113 | PMID: 28812709 | |||
| Cellular senescence | ko04218 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_56674-1.7 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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