Gene detail

Detailed information of Bpl_scaf_56339-11.35 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_56339-11.35	PRENYLTRANSFERASES	Bpl_scaf_56339	1148157	1164557	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_56339-11.35

AGAGTTAAAATGAATATTACAAAGAATATTTTCTTGATGAACAGTCTAAGAATTAACATAAAAACTTCTCACAACAGAATTATTGGTGTCTTAACAGCTCCGTGTGTTCAGTGTTTGCATAATCAAACTGGAAAAAACAACAATCGAACATCAAGAGTATCACAGAACTTTGTTCATTTATCTCAGAAAAACTTTTCAAATTCCTGTAGATTTGAAGTAGAAAGATGGTCTAATGATAATAAAATTTTACTTAATAATAAAACACTGTATAACCAGTCTAGAAGAAGCTTGATAAGTAAACAACAAAATATACATTGGAGTAGAAAGAGTAAAGTATTGAGAAGGAAAAATGTTTGTTTAGTTCACCAAAGAGATTTGAGTTTGTCTCCCAAGTCCATATTAGATGCCTCACCGACAAGTTTACAGCCTTACCTTAGACTTATTAGATTTGACAAACCAATAGGTACTTGGTTATTGTATTGGCCCTGTACATGGAGCATAGGTTTAGCTGCTGCACCAGGTAATCTTCCTGACATTTGGCTTTTGACCTTATTTGGGGCAGGTGCATTCTTCATGAGAGGTGCAGGTTGTATCGTAAATGATATGTGGGACAGAGATATTGACAAAAAGGTAGAAAGAACTAGATTACGACCTTTAACCAGTGGAGAATTAAGTTCCTTCCAAGGGCTTTGTTGTCTTGGTGGAATGTTATCTGTGTCATTATTTATACTCCTACAGTTTAACTGGTACAGGATTGACATTAAATTGGGGTGTCCTGTTAGCCTGGTCCGCGATACAAGGAAGTATCCAGGGCCCAGTTGTGTCCCTTTATGTATCGTGTGTTTTGTACACAATGATCTACGATTCCATTTATTCCCATCAGGGTTGACCTTCAACTATGGGACTATGTTAGGTTGGGCAGCAGTCACTGGTGGGGTTGATTGGACCATTGTCCTACCCCTATATATCAGTTGTATGGCATGGACTCTCGCCTATGACACTATTTATGCTCATCAAGATAAATATGACGATATGCTGATTGGAGTCAAATCTACAGCTTTAAAGTTTGGTGACAAGACCAAACATTGGTTGTCTGGATTTGGGACAATTATGATTGGTGGTCTGACTTACACAGGGATAGCTTGTGATCAAACATGGCCATATTTTACTGGGGTAGCTATAACTGCAGCCCATATTGCTCATCAGTTGTATACAGTTGACCTAGATAATGCCGATGACTGTGCTACCAAATTTAGATCTAATACAGGACTGGGATTGATCATGTTTTTAGGAGTCGTGTTGGGAACATTAATGAAAACACCAAATAAGGAAACAAAAAAAATTGAAGAAGTTGTGAATTAGATAATGGACAAGTTAATTTAATTGTTATGCTTTTATGAAAAGTAATTGTTATACATTTGGTTTGAAGCCAACATACATATATTAGCAAATTTTATGCCCCCTATGCCGTTAATTTTTCCTATATCTGTCTGTCCTGCATTTGGTATTCTTTCAATAACATTAGTTTCCCTTGAGCAGATCATTTGAAATTATAAATTAAGACGGGCACCATAAACCGTGAACCAAAACCAGTATTTGAATTTAATACTCTTTCCATTTAATAGTTATACTCCTTGATAAGCTATTGAAGGGAAACCTGTAAAATCAAGAGAGAAAAAATAAATTCCTCATGTTTCCCTTCAATATCTTAAGTTCCAAATCATTTAAAATTTATATACAATGTTTTCCAACAGCAATACACATGTCAAGTTCAATTTATGCTATTACTGGTATGCCTTTTAATAGTTCTCGAGTTTGTGTCACTGTTTACTTTAGGTGGAAGCTATGTCCTATAGACACATTTTTTGTATCTGAATTACCCTATGCTTTTTATGAAACTTGTATGGTGTGTGTAAGATAGTACAAATTTTTATATAATGTTTTAAATGCTTAACTAGAACAATGTACTTGTATGTGAGTTTTTATACATATAAAAACAGATCAAATTG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01040	UbiA	UbiA prenyltransferase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000537	Family	UbiA prenyltransferase family	Interproscan
IPR006370	Family	4-hydroxybenzoate polyprenyltransferase-like	Interproscan
IPR030470	Conserved_site	UbiA prenyltransferase conserved site	Interproscan
IPR039653	Family	Prenyltransferase	Interproscan
IPR044878	Homologous_superfamily	UbiA prenyltransferase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11048	PRENYLTRANSFERASES	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0002083	Molecular Function	obsolete 4-hydroxybenzoate decaprenyltransferase activity	Interproscan
GO:0004659	Molecular Function	prenyltransferase activity	Interproscan
GO:0006744	Biological Process	ubiquinone biosynthetic process	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016765	Molecular Function	transferase activity, transferring alkyl or aryl (other than methyl) groups	Interproscan
GO:0031305	Cellular Component	obsolete integral component of mitochondrial inner membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06125	COQ2; 4-hydroxybenzoate polyprenyltransferase	EC:2.5.1.39	Ubiquinone and other terpenoid-quinone biosynthesis	ko00130	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_56339-11.35 global RNA-seq network