| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_56339-11.34 | TRNA-DIHYDROURIDINE SYNTHASE | Bpl_scaf_56339 | 1100400 | 1108163 | - |
| CDS | |||||
| Bpl_scaf_56339-11.34 | |||||
| Transcript |
| Bpl_scaf_56339-11.34 |
| Protein |
| Bpl_scaf_56339-11.34 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01207 | Dus | Dihydrouridine synthase (Dus) | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001269 | Family | tRNA-dihydrouridine synthase | Interproscan |
| IPR013785 | Homologous_superfamily | Aldolase-type TIM barrel | Interproscan |
| IPR018517 | Conserved_site | tRNA-dihydrouridine synthase, conserved site | Interproscan |
| IPR035587 | Domain | DUS-like, FMN-binding domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11082 | TRNA-DIHYDROURIDINE SYNTHASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0008033 | Biological Process | tRNA processing | Interproscan |
| GO:0017150 | Molecular Function | tRNA dihydrouridine synthase activity | Interproscan |
| GO:0050660 | Molecular Function | flavin adenine dinucleotide binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K05545 | DUS4; tRNA-dihydrouridine synthase 4 | EC:1.3.1.90 | Transfer RNA biogenesis | ko03016 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_56339-11.34 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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