Detailed information of Bpl_scaf_56222-1.19 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_56222-1.19CONDENSINBpl_scaf_56222120904163462+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12717Cnd1non-SMC mitotic condensation complex subunit 1RepeatInterproscan
PF12765Cohesin_HEATHEAT repeat associated with sister chromatid cohesionRepeatInterproscan
PF12922Cnd1_Nnon-SMC mitotic condensation complex subunit 1, N-termRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR007673FamilyCondensin subunit 1Interproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR024324DomainCondensin complex subunit 1, N-terminalInterproscan
IPR026003RepeatHEAT repeat associated with sister chromatid cohesion proteinInterproscan
IPR026971FamilyCondensin subunit 1/Condensin-2 complex subunit D3Interproscan
IPR032682DomainCondensin complex subunit 1, C-terminalInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR14222CONDENSINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000278Biological Processmitotic cell cycleInterproscan
GO:0000779Cellular Componentcondensed chromosome, centromeric regionInterproscan
GO:0000799Cellular Componentcondensin complexInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0007076Biological Processmitotic chromosome condensationInterproscan
GO:0010032Biological Processmeiotic chromosome condensationInterproscan
GO:0030261Biological Processchromosome condensationInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06677YCS4, CNAP1, CAPD2; condensin complex subunit 1-Cell cycle - yeast ko04111PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_56222-1.19 global RNA-seq network
TOP