| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_55004-3.20 | GLUTAMATE--TRNA LIGASE | Bpl_scaf_55004 | 358098 | 384755 | - |
| CDS | |||||
| Bpl_scaf_55004-3.20 | |||||
| Transcript |
| Bpl_scaf_55004-3.20 |
| Protein |
| Bpl_scaf_55004-3.20 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00749 | tRNA-synt_1c | tRNA synthetases class I (E and Q), catalytic domain | Domain | Interproscan |
| PF19269 | Anticodon_2 | Anticodon binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000924 | Family | Glutamyl/glutaminyl-tRNA synthetase | Interproscan |
| IPR004527 | Family | Glutamate-tRNA ligase, bacterial/mitochondrial | Interproscan |
| IPR008925 | Homologous_superfamily | Aminoacyl-tRNA synthetase, class I, anticodon-binding superfamily | Interproscan |
| IPR014729 | Homologous_superfamily | Rossmann-like alpha/beta/alpha sandwich fold | Interproscan |
| IPR020058 | Domain | Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain | Interproscan |
| IPR020751 | Homologous_superfamily | Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 | Interproscan |
| IPR033910 | Domain | Glutamyl-tRNA synthetase | Interproscan |
| IPR045462 | Domain | Aminoacyl-tRNA synthetase, class I, anticodon-binding | Interproscan |
| IPR049940 | Family | Glutamyl-Q tRNA(Asp) synthetase/Glutamate--tRNA ligase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR43311 | GLUTAMATE--TRNA LIGASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000049 | Molecular Function | tRNA binding | Interproscan |
| GO:0000166 | Molecular Function | nucleotide binding | Interproscan |
| GO:0004812 | Molecular Function | aminoacyl-tRNA ligase activity | Interproscan |
| GO:0004818 | Molecular Function | glutamate-tRNA ligase activity | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0005739 | Cellular Component | mitochondrion | Interproscan |
| GO:0006424 | Biological Process | glutamyl-tRNA aminoacylation | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0043039 | Biological Process | tRNA aminoacylation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K01885 | EARS, gltX; glutamyl-tRNA synthetase | EC:6.1.1.17 | Porphyrin and chlorophyll metabolism | ko00860 | PMID: 28812709 |
| Aminoacyl-tRNA biosynthesis | ko00970 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_55004-3.20 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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