Gene detail

Detailed information of Bpl_scaf_54699-0.7 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_54699-0.7	BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN PURH	Bpl_scaf_54699	6711	38535	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_54699-0.7

CCAGTGCATATTTCCCGCCAGTGCAAAAAAGAGGAGTCCCGAACTTATCCACGTGGAAATTTGAAGAATGGCAACAACAAGAGAACTCGCTTTGTTGAGTGTGTCTGATAAAAGAGGACTAATAGAGTTTGCTAAGAACTTATCTGCCCTTGGATTAGACTTGATTGCATCTGGTGGGACTGCCAAAGCCATTAGAGATGCTGGAATTCCAGTCAGAGATGTGTCTGAAATCACAGGTGCACCAGAAATGTTGGGAGGTCGTGTCAAAACACTGCATCCAGCAGTACATGCAGGTATACTATGCAGAATGACAGATTCTGACCAGCAAGATATGGAGAAACAGAATTACCAGATGATCAGGGTTGTAGTTAATAACTTATATCCATTTGTAAAGACTGTGGCTGATCCTAATGTACTTGTGGAGAAGGCAGTAGAACAAATAGACATTGGTGGTGTAACATTGCTAAGAGCTGCAGCTAAAAATCATGCCAGAGTTACAGTTGCTTGTGATCCAGAAGATTATAACAGAATTGTAGAAGAAATGAAGAGCTCTAAAGATAACAACACTTCAGAAGATTTGAGGAGGAAGTTAGCTGTCAAGGCTTTCAACCATACAGCAGAATATGATAGAGCTATATCAGACTACTTCAGAAGACAGTACAGTGCTGGACAGTCACAGTTGACGCTGAGATATGGAATGAATCCTCACCAGAAGCCTGCTCAACTGTTTACAGACATGGCACAGTTACCACTAACAGTTGTAAATGGTTCCCCAGGATTTATCAATCTATGTGATGCTCTGAATGGTTGGCAGCTGGTAAAAGAATTACGTCAAGCTTGTAACAGACCAGCTGCAACATCCTTCAAACATGTCAGCCCAGCAGGAGCTGCTGTTGGAGGCCAGGGTATGTCTGAGGCAGATAGAAAAGTTTGTATGGTAGAAGACTTGGAGAATCTATCACCATTAGCAGAAGCTTATGCCAGGGCAAGAGGAGCAGACAGAATGTCATCATTTGGAGATTTTATTGCGTTATCTGATACATGTGATGTACTAACAGCTAGGATTATTTCAAGGGAGGTATCTGATGGTATCATTGCTCCAGGCTATTTACCAGAAGCATTGGAAATACTCAAGAAAAAGAAGGGAGGCAACTATTGTGTTCTTCAGATGGACCCAGAATATCAAGCCCCTTTGATGGAAACCAGGACTTTATTTGGACTTCAAATGCAACAGAAGAGAAATGATGCTGTTATAAATACAGAAATGATGAAAAATGTGGTCTCTAACAGAAAGGAGCTTACAAAAGAGGCAATTCAGGATCTGATTGTTGCCAGCATTACATTGAAGTATACACAGTCTAATTCTGTCTGCTATGCTAAAGGTGGTCAGGTGATAGGTATAGGAGCTGGTCAACAGTCCAGGATACATTGTACCAGATTAGCAGGGGACAAGGCTAATAACTGGTGGCTGAGACAACACCCCAAAGTGTTAAATATGATATTCAAGGATGGAGTGAAGCGAGCAGAGAAAAATAATGCTATTGATCAATACGTCTTGGGAACAGTTGGCACTGATCAGGATAAGGAATCATGGGATAGTATGTTTGATGTCCCACCAGCTCCACTGACAGAGGAAGAGAGACGTAATTGGATTCTACAGTTAAAAGGAGTGTGCTTGAGTTCTGATGCTTTCTTCCCATTCAGAGATAACATTGATAGAGCTGCTTTGAGTGGAGTGGAGTACATTGTGTCACCAGCTGGGTCTACTAATGATGAAGGTGTAACCAAAGCCTGTAACGAGCACAACATGGTCTTAGTCCATACCAACTTACGTCTCTTCCACCATTAACTGTCACATGAAAGTCAAGATCAACATTTGTTGTTTTTTTCTTTTTTACCAGACAACGTACAAAGATGTCTCATTCACCAAATATTTACAAAATTAATTGAGACCATTATTGTGGTAGTTTGCAATATAAGGGGAGAGCAATCTTGTAATGTATGTAATTAAGGTATTCATAATTTAGTATGTCTGTAATACTCAATTTTTGTAAGCTTACATGTACAAAGGCCATTAGAGATTTTGTCTTCTATTAGATAGTATTTGTCTTCGTCATTAGCTTCACACTTACTGCTTTTCACCTGTAAACAATTGTGCCATATCAAATCAAAACTGTTGTCTAGAATTGGACACATTCAAGATGGCCACCAAGACTAAAGAGGAAGTCTTTTTTAAAATGATGGAAACAGTTTACTCAGAAATTGGTTGAACTTTGAACTGTTGCTACATGTATAATATATTGTTTTACATTTAGTGCTGAATTTTTGTGATTATGCAAATTAATCTTCCTATATAAATTAGATCTGACTGACATAATCTCATTCCAACATAAATTCTTCAGGTCTTAAAAAATTTTGACCAGTCATGATTTTTTAATAGCTGCAGTTTGAACAATCTCTTCCAGAGTTATCTCTTCTTGGTCTCGCATCAACCTCTGTCAACGTCAGAGCTTTTACAAGATTGTTGTAAAACTAGAACTAATCTCATTCAAGCAAAATACTCAATTATGGAGTATTATAAGCTCAAATTTCAAATATTTATCTGTTTATCTTGCACTTGTTATCACAGATTTGAATAATTTCCAGATTGTTTCCCATATTACTTTGTTATAATGTATGATTAGAATGCATTTGTGGTAATCTAAGCAATCATAGTCGGAACGGAATAACATTTGAACAATGTTAAATTCATTTAAGAAATAAATCATGGAAGCCAGAATGTGTTTTGAGTTTTAACATGGGTTGGTGAATGTTAGTATTTTATCCCGAGCCTCTGGCTTGTGGTTAAAATTTTAAATTTAAATCTCTTGAGTGGAGAAATATCGTAACCCGCTGGCAACTGAAGGAGAATCTATATTTATTTAATAATTTTATTACTTGGCTTAAATGTGTGCACTGGGGCATGTGCTAATGAGATTATACCCAATCGATAAATCACTCGTTTGTTTACAAAGCGAAAGAAGGACATCGTGTTAGAATCCCGATTAAATTCTGTTTTTATTTCAATATTCTTGCACAAAACTTTTAATTATGTGAGGCATTGACAGTAAAGAATGATAACTCTGTTAGAGATTAAGGTTTGAACTGTTGCTTTATGATGATGAGTTGTATGGGTAATTATTTCATCCGAATTGTTCATAATCATGAAATGATTTTATTTTGTTGTTTTATTGCCACTATAAAGAAATTGGAAGAAGATATCTTGATGCAGTCATAATACTGTATAGCCATATAAAATTATAATGATTTTGCATGGAAAAAAAATGTGGCTATATTTGATGGTTTGTTTTTTCAAAGCTACCTTCAGTTTTCTGGTGCACATTGTGAAGGCTCAGCACATTAATATTGACAGTTTTTATTTTGACCATGTCATCAAAAAGCTAAAGAAAACTAATATGTGTACCCTGGAAAAAATAACCAGCTATCGGTAGGGTATACAGTATTTAAGGGGAATTTGACAAAACAGGAATTTAATTTCAAAGATGAACATTGTCCTCGAAATGAAAATGTTAATTTACTGAACCGAATCAAATTCTTGAATAAGTGAATAAAAACTGAAAATTTGTATTGGTCCTAACAAAGTTTACTGGTTTTTGGGCTGGAGGATCTGTGCTTGTCGTGAGGAATGTGAACAAAATTAGATTTCTGATGATTTAATATATTTATATTATATTTAGAATTATAATATAGAAATATAGAGTTGTGATGAATTGTGCCATATTTACAATAAAAGTTTTGTTGTGGGTTTTTTTTGGGACCAATTATTTATGTTGAAAAGTTTTTGTATTCATGTATTGTATACCCCAAGTGCTGTTCAAT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01808	AICARFT_IMPCHas	AICARFT/IMPCHase bienzyme	Family	Interproscan
PF02142	MGS	MGS-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002695	Family	Bifunctional purine biosynthesis protein PurH-like	Interproscan
IPR011607	Domain	Methylglyoxal synthase-like domain	Interproscan
IPR016193	Homologous_superfamily	Cytidine deaminase-like	Interproscan
IPR024050	Homologous_superfamily	AICAR transformylase, insert domain superfamily	Interproscan
IPR024051	Homologous_superfamily	AICAR transformylase, duplicated domain superfamily	Interproscan
IPR036914	Homologous_superfamily	Methylglyoxal synthase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11692	BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN PURH	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0003937	Molecular Function	IMP cyclohydrolase activity	Interproscan
GO:0004643	Molecular Function	phosphoribosylaminoimidazolecarboxamide formyltransferase activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006164	Biological Process	purine nucleotide biosynthetic process	Interproscan
GO:0006189	Biological Process	'de novo' IMP biosynthetic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00602	purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase	EC:2.1.2.3 EC:3.5.4.10	Purine metabolism	ko00230	PMID: 28812709
			One carbon pool by folate	ko00670	PMID: 28812709
			Antifolate resistance	ko01523	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_54699-0.7 global RNA-seq network