Gene detail

Detailed information of Bpl_scaf_54665-11.8 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_54665-11.8	FAS-BINDING FACTOR 1	Bpl_scaf_54665	1125157	1176010	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_54665-11.8

ATGGCTAATTCATGGACCCCTGGAAACAAGAAACAGCAGAAAGGAAAGAAAGGTTCTGATGTTCTTGATGATTTAATTGGAGACCTGCTTGTAGAAGATGCTTCACCAAAGAAAAAGCCAGTACAACATGCACCTGCTGGAAGAAATAGATCACTTGAAGGAAAAAGACAAGGATCTCGAGATGAAGATTTCTACAGTAACATAGCAGCAAATGCTGAGGATGGTCTGTCTGATGTATCAGAAGCTGATGTTAAGGAAATGGCACAGAGTATCAAAGATCTTGAAGATATGGATGCCGATTTGTTTGGTGGAAAACTGAAGAAAAAAGGAAGTACAAAAGGTGGTAGTTCCAGTAAGACTAACACTCCTCGTAGGGGTGGAACTCCAAGATCACGTAGTACCACTCCAAGAGCTGTATCTCCTCAACAAAAAAATACCACCCCTAATGCTAGAGTAACTTCTCCTTCTCCTGGAGCTAAAAGTCCAACGGTAGGGGGAGCATCCACTTGGAATGACCAGCCTGTTAGTCCTAGAGGTGTTTCGAGGGACAGGCCTGGTAGTGGTGGCAGAACTGGTACCCCTGCAGCTGGTGTCACTTTGAATGACCCATCTACTAGCCCTAGAGGTGTTTCCAGGGATAGGCCTGGTAGTGGTGGCAGAACTGGTACCCCCTCAGCCGGTGTCACTTGGAGTGACCCATCTACCAGTCCTAGGGGTGTGTCTAGAGACAGGCAAGGTAGTGGAGGAAGTCGAGGGGCTCCCTCAGTTCCAGTATCCAAATCTCAAGATGTAACAATACCCAAGCCTAGTTCAGCTCCAGGAAAATCTTCAGATATAGGCAGTGCATCAAATAATTTAAAGCCAGGTGCAACACCTCCTGTAGAAAGACCTGGAACAGTCCCCAAGACAAAACCAAAATATGACTTTGGAGAATTTGATGAAGATGACCCATTAGCTGGTCTACTTAGTGATGAAGAGGATGATGATTCGTGGGCCACAAAACCAGCAACCAAGAGATCGTCACTGAAGAAAAAAGAAGAACCCAAAAAACCAGAACCAGAGCCTGTTAAAGTAGTGGAAGAGCCTAAAAAGAATTTGTATGAGAGACCCCCAACAAGAAGTGGATCAGACAAGAAAGTTGAAGAAGAACCTGAAACAGCTGTATCTAAACAAGTTGCAGCAACTAAGAAAAAGGAGGATGCTGGTATATTCAGTGATGATGACGATTTCTTGGGAGGTCTAGGGATAGAGGATAAGGGATCTGCTGGACCAGTACCATCTGCTGCTGAGATAGAGGACCTTGACAGTGAAGGGGAAGAAAAACCATCTAGAATGTTTGATAAACTGCTTGGAAAAGACAGTGTATCTAAACACTTGGAAACAAAACAAAGAAAAGAATTTGTTCTGGATAATAAATATTCACAGCCAGAAGAGGAGGAAGAAGACTATGCCTTTGGAAGTTACATGCCATCTGTAGCTGGATCTACCTCAGGGTCTAGGCCTGGTTCTCGAAGATCTGTCAGATTTCAAGATGAAGATGACATTTTTGGTTTTGACAAACCACCGTCTAGAGGAAGATCTTCTGCAAGTAAAAAACCAGATGGTATGGATTGGCTGGATCATATGAGCCCTTCTCCTAGGTCTCCACAGACCAAAGAAAATGTTTCAACAGAGGATTCGTCAAGCAACAAAACTACAGCACCTAAAGATACACCTGCAAAAGATACCTCTTCTAAAGAACTACCAAGTGCATTGAAATCTGCTTCTGCACCAGCACAGAAAACAATGAACAAACCAAAGGTGGATCCATTTGAATATCTTGGTTTGAAAGATGATGATGATGATGCATTTGAATGGATGAAGCCCAAGCATACTGAAACCAGACCAAGAACAGGGGAACAGAGACTGGCACCTGTTACACCTCCACAAACATCAGAGAGCAGACCAAGTACAGGGGAACAGAAACTGGGGCCCGTTACACCTCCACAAACAGCTCCTAAGATGACCGAAGCTACTCCTAAGGTGGAACAATCTATGGCTGATCAGTCACCTGATGACTATTTAGGTCTTGGTGGCGAAGTCGACCTAGATTCTTTTCTTAAGAAAACTCCAGATTCCCCTCTGTTTGGTGGAGCACGTGTTTCTGATACAGAGAAAAATTTATTTACAACGCCAGCTAAAACTGATCATTCGGCTATGTGGGAATCCTCCTCCAGAAGAAGAATGTCAAGGTCTGGCAGTACAGATAGAGGAATTGATTCCATATTACAAAAAGAGTCATTAATATCTGATGACCCTGCAATATCAGATCATCATCCATCCAATCAACTACAACAAAAAGATTCACAGCAACCTGACTTCCTGTCTAGTAAACCAGAACCTAACATCATCTCTGGCAAACCAGAACCAGATTTCTTTTCAAGTAAACCAGACACTAGTAGTCGAACTACAGATTTCTTCAACTTTAGTCAAGCTGATCGACAAAGACAGAACGAAGCTAAAACTCAAATAAGTCCAGAGAAAGCAGCAGACCAAGTACTTCAACAGCAAGCCCAGATGCAGGCATTAATTCAACTACAACAACAGCAATATCAACAAATGCTTCAAAACCAGCAACCTCTTCCCAGTGTACAGGGAGAGAGATTGATGGGTAACATTGGCATGTTGGGGGCACTGGATCCAGATGCCAGGATTAGGAAGTTAGAGATAGAAATTGATTGTGCCAATTCATTATTGGAATCAACAAAGAAAAGACATCAAGATGAAATTAAAGACATTGAAAGCTCGTACAAATTAAGAGAAGAAAATGAATATTTGATGGAACAACACCTGACCAAAATCAGGAATTTTGAGCAGGATAAATCTGACATTATAACTCAAAACTTTAAAAAGATAGAAGAAATGGAGAGAGAAAAGATGGAAGATTTAAGTAGAATTAAAGAACACCATAGAAGTGCTATTGAGCAGTTAAGGAAGGACCATGAAGAATCCTTAATTAGATTGAAAACTGCTAAAGATAGCCAAATAGAAGCTGTGGCTATATCACATGATACAACCAAGTTAGTTATTTTTAAAATTATATTGAAATATTTATGCACTGTTGGGATGATACAAACAAATGCTAGAGATGTTGGGGAACTTCAGAAAAAGTTAGACCAATGGCACAGTATGGGGATGGATGAACGAGAGATAGCCATTAGATCTAAGGATGAACAATTAAAAATTTTACAAGAAAGACTTAGAAAGCAGCAGGATGACAATGATAATGAAAGAAGACGTTTAGAAGATCTGATCACACGACTAGAGACTCAGATCAGAGAACAGAGTAGAGTGCATGATGAGGAATCTTTACTAGAAGAACAAAAATCTGTGTTGTCACAATTACATAGAGAGAGACAGGCTTTAGCTGAAGAAAGAACACAGTTTATGGTTACACAAAAGAGCCGTAGAGATGACTTGGAAAATTATACTGTCAAGCTTTCTCAGGAAGCTAACAGTAAATTTGAAGAAGGTATGATGGCTTTGGAAACTTCACAGAGAATTGAAGCTGAAGAAAATCAAAGACTTGAGAAGATTTCTAAACAGATGCAGTCACTTCAGAATAAAGAAAAAGAGATTGCAGAGGAAAGATTGCGACTTTCTAAAGAGAAAAAGGAAGTAGAGAATCTTAGAAGTTCAGCATTATGTCCAAATTGTAGGTCACCAGCATCAGGAAGTAAAATTATAGCTCAAACAAATGGGCATGATACAAATGTCGCTGTGAATGGACATTACACCAATATGCCTCCTCAAAATTACCAAAGTCCCTACCAGACTACCTCTCGTCCACACTCAGGAGGACATATCTCACTCAACTCTGTATCAGAATCTATTAAAGCTGATAGATCTATCAGAATGTGGAAAATGGAAGCTTTCAAGGTATAA

Transcript

Bpl_scaf_54665-11.8

AAAAACCAGTCAATGTTATGATGTCGAATTGTTCAGAAAAAGAAATAATATGATGAATGCACATTTATATACTGCACACATGGTGTAATCTTCTACACACACAACAAACATGGCTAATTCATGGACCCCTGGAAACAAGAAACAGCAGAAAGGAAAGAAAGGTTCTGATGTTCTTGATGATTTAATTGGAGACCTGCTTGTAGAAGATGCTTCACCAAAGAAAAAGCCAGTACAACATGCACCTGCTGGAAGAAATAGATCACTTGAAGGAAAAAGACAAGGATCTCGAGATGAAGATTTCTACAGTAACATAGCAGCAAATGCTGAGGATGGTCTGTCTGATGTATCAGAAGCTGATGTTAAGGAAATGGCACAGAGTATCAAAGATCTTGAAGATATGGATGCCGATTTGTTTGGTGGAAAACTGAAGAAAAAAGGAAGTACAAAAGGTGGTAGTTCCAGTAAGACTAACACTCCTCGTAGGGGTGGAACTCCAAGATCACGTAGTACCACTCCAAGAGCTGTATCTCCTCAACAAAAAAATACCACCCCTAATGCTAGAGTAACTTCTCCTTCTCCTGGAGCTAAAAGTCCAACGGTAGGGGGAGCATCCACTTGGAATGACCAGCCTGTTAGTCCTAGAGGTGTTTCGAGGGACAGGCCTGGTAGTGGTGGCAGAACTGGTACCCCTGCAGCTGGTGTCACTTTGAATGACCCATCTACTAGCCCTAGAGGTGTTTCCAGGGATAGGCCTGGTAGTGGTGGCAGAACTGGTACCCCCTCAGCCGGTGTCACTTGGAGTGACCCATCTACCAGTCCTAGGGGTGTGTCTAGAGACAGGCAAGGTAGTGGAGGAAGTCGAGGGGCTCCCTCAGTTCCAGTATCCAAATCTCAAGATGTAACAATACCCAAGCCTAGTTCAGCTCCAGGAAAATCTTCAGATATAGGCAGTGCATCAAATAATTTAAAGCCAGGTGCAACACCTCCTGTAGAAAGACCTGGAACAGTCCCCAAGACAAAACCAAAATATGACTTTGGAGAATTTGATGAAGATGACCCATTAGCTGGTCTACTTAGTGATGAAGAGGATGATGATTCGTGGGCCACAAAACCAGCAACCAAGAGATCGTCACTGAAGAAAAAAGAAGAACCCAAAAAACCAGAACCAGAGCCTGTTAAAGTAGTGGAAGAGCCTAAAAAGAATTTGTATGAGAGACCCCCAACAAGAAGTGGATCAGACAAGAAAGTTGAAGAAGAACCTGAAACAGCTGTATCTAAACAAGTTGCAGCAACTAAGAAAAAGGAGGATGCTGGTATATTCAGTGATGATGACGATTTCTTGGGAGGTCTAGGGATAGAGGATAAGGGATCTGCTGGACCAGTACCATCTGCTGCTGAGATAGAGGACCTTGACAGTGAAGGGGAAGAAAAACCATCTAGAATGTTTGATAAACTGCTTGGAAAAGACAGTGTATCTAAACACTTGGAAACAAAACAAAGAAAAGAATTTGTTCTGGATAATAAATATTCACAGCCAGAAGAGGAGGAAGAAGACTATGCCTTTGGAAGTTACATGCCATCTGTAGCTGGATCTACCTCAGGGTCTAGGCCTGGTTCTCGAAGATCTGTCAGATTTCAAGATGAAGATGACATTTTTGGTTTTGACAAACCACCGTCTAGAGGAAGATCTTCTGCAAGTAAAAAACCAGATGGTATGGATTGGCTGGATCATATGAGCCCTTCTCCTAGGTCTCCACAGACCAAAGAAAATGTTTCAACAGAGGATTCGTCAAGCAACAAAACTACAGCACCTAAAGATACACCTGCAAAAGATACCTCTTCTAAAGAACTACCAAGTGCATTGAAATCTGCTTCTGCACCAGCACAGAAAACAATGAACAAACCAAAGGTGGATCCATTTGAATATCTTGGTTTGAAAGATGATGATGATGATGCATTTGAATGGATGAAGCCCAAGCATACTGAAACCAGACCAAGAACAGGGGAACAGAGACTGGCACCTGTTACACCTCCACAAACATCAGAGAGCAGACCAAGTACAGGGGAACAGAAACTGGGGCCCGTTACACCTCCACAAACAGCTCCTAAGATGACCGAAGCTACTCCTAAGGTGGAACAATCTATGGCTGATCAGTCACCTGATGACTATTTAGGTCTTGGTGGCGAAGTCGACCTAGATTCTTTTCTTAAGAAAACTCCAGATTCCCCTCTGTTTGGTGGAGCACGTGTTTCTGATACAGAGAAAAATTTATTTACAACGCCAGCTAAAACTGATCATTCGGCTATGTGGGAATCCTCCTCCAGAAGAAGAATGTCAAGGTCTGGCAGTACAGATAGAGGAATTGATTCCATATTACAAAAAGAGTCATTAATATCTGATGACCCTGCAATATCAGATCATCATCCATCCAATCAACTACAACAAAAAGATTCACAGCAACCTGACTTCCTGTCTAGTAAACCAGAACCTAACATCATCTCTGGCAAACCAGAACCAGATTTCTTTTCAAGTAAACCAGACACTAGTAGTCGAACTACAGATTTCTTCAACTTTAGTCAAGCTGATCGACAAAGACAGAACGAAGCTAAAACTCAAATAAGTCCAGAGAAAGCAGCAGACCAAGTACTTCAACAGCAAGCCCAGATGCAGGCATTAATTCAACTACAACAACAGCAATATCAACAAATGCTTCAAAACCAGCAACCTCTTCCCAGTGTACAGGGAGAGAGATTGATGGGTAACATTGGCATGTTGGGGGCACTGGATCCAGATGCCAGGATTAGGAAGTTAGAGATAGAAATTGATTGTGCCAATTCATTATTGGAATCAACAAAGAAAAGACATCAAGATGAAATTAAAGACATTGAAAGCTCGTACAAATTAAGAGAAGAAAATGAATATTTGATGGAACAACACCTGACCAAAATCAGGAATTTTGAGCAGGATAAATCTGACATTATAACTCAAAACTTTAAAAAGATAGAAGAAATGGAGAGAGAAAAGATGGAAGATTTAAGTAGAATTAAAGAACACCATAGAAGTGCTATTGAGCAGTTAAGGAAGGACCATGAAGAATCCTTAATTAGATTGAAAACTGCTAAAGATAGCCAAATAGAAGCTGTGGCTATATCACATGATACAACCAAGTTAGTTATTTTTAAAATTATATTGAAATATTTATGCACTGTTGGGATGATACAAACAAATGCTAGAGATGTTGGGGAACTTCAGAAAAAGTTAGACCAATGGCACAGTATGGGGATGGATGAACGAGAGATAGCCATTAGATCTAAGGATGAACAATTAAAAATTTTACAAGAAAGACTTAGAAAGCAGCAGGATGACAATGATAATGAAAGAAGACGTTTAGAAGATCTGATCACACGACTAGAGACTCAGATCAGAGAACAGAGTAGAGTGCATGATGAGGAATCTTTACTAGAAGAACAAAAATCTGTGTTGTCACAATTACATAGAGAGAGACAGGCTTTAGCTGAAGAAAGAACACAGTTTATGGTTACACAAAAGAGCCGTAGAGATGACTTGGAAAATTATACTGTCAAGCTTTCTCAGGAAGCTAACAGTAAATTTGAAGAAGGTATGATGGCTTTGGAAACTTCACAGAGAATTGAAGCTGAAGAAAATCAAAGACTTGAGAAGATTTCTAAACAGATGCAGTCACTTCAGAATAAAGAAAAAGAGATTGCAGAGGAAAGATTGCGACTTTCTAAAGAGAAAAAGGAAGTAGAGAATCTTAGAAGTTCAGCATTATGTCCAAATTGTAGGTCACCAGCATCAGGAAGTAAAATTATAGCTCAAACAAATGGGCATGATACAAATGTCGCTGTGAATGGACATTACACCAATATGCCTCCTCAAAATTACCAAAGTCCCTACCAGACTACCTCTCGTCCACACTCAGGAGGACATATCTCACTCAACTCTGTATCAGAATCTATTAAAGCTGATAGATCTATCAGAATGTGGAAAATGGAAGCTTTCAAGGTATAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21007	FBF1	Fas-binding factor 1	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR033561	Family	Fas-binding factor 1	Interproscan
IPR049390	Domain	Fas-binding factor 1, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR33689	FAS-BINDING FACTOR 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005814	Cellular Component	centriole	Interproscan
GO:0036064	Cellular Component	ciliary basal body	Interproscan
GO:0060271	Biological Process	cilium assembly	Interproscan
GO:0090162	Biological Process	establishment of epithelial cell polarity	Interproscan
GO:0097539	Cellular Component	ciliary transition fiber	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K16471	FBF1, ALB; Fas-binding factor 1	-	Cilium and associated proteins	ko03037	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_54665-11.8 global RNA-seq network