Gene detail

Detailed information of Bpl_scaf_54411-6.19 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_54411-6.19	GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2	Bpl_scaf_54411	686125	701304	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_54411-6.19

ATGTACGGTCATCTGAATGTATTCATCAAAAACTTTATTACAGAAAGACATGGACAACAGTCATGGAACACTATAATAAAATCATTGAATCATTCTGGGAATTTTAACGCACAAGACCAAAATGATGACGATTTAACACAGAGGCTGATCAATCTATCAGTGGAACACTTAGGATTCAAAAGAGAAGCCTTCCTGATTTTGATTGGAGAGTATATATTCCATTACCTCACTCGGTTTGGATATGACGAACTGGTTCGCTTGCTTGGTGGAAATATCCTTGAATTTGTGCAGAATTTGGATTCCATTCAGAATTATCTACGTGATGATTACCAGGACACAATAGCACCATCCTTCCACTGTGACGAGGAATCTGTCTCAGATAGAATGGTTCTACATTACTACTCCCACAGACCTGGTTACCACCCATTAATTAGAGGCTTTGTAACAGAAACCGCCAAATCTCTGTACAAGATGGAACTATCTATAACAGTTATATCTATGTCAAAAGAGACGGTCGCAGAGGAATATGGTCAGCGTGAACACGTCATATTTAATATTGTGGCTAAGAAAATTGTCGAAACAATGGACGACTCGCCTCCAACGTTTGTTGCACAGACAAGGAAACATGGCGAACGGCAAATCTTAAAAGAGGATGTAGAAGCAGTGAGAGAAAAGTTGGATCAAATTCGGAAAGAGTTTGGAGAAGAAGCACTTCCAATGGCGAGATTTCGCAGCGCAAAAGCAAAATGGCGCGCAATTGCGAGGATTACGCTACTCAGCAGAGGATTTGTTCCAAACTATCCCGAACAAAATTTCATAAACCCCAGAATGTTCATAGAAATCTTTCCGTATCATTTAATCATGAATGAGGAAATGAAGGTGATCCAGTCTGGAATCCGAATCCAACAGATGATGCCACTGATCAGGAGTAGTAGAACAGCTGATGTCAACTTGTTCTTCAATCTACTATACCCCAGACATACTGACTTTACATATGAAAACGTCAAGAAGTTTATAATGTGCCCATTCGCTTTAGAGTTTAAGAGAGAGAAATTAGCAAAAGAATGGAAGAAACGACCATTACTTGTTCTCAAGGGTCAGATGTACCTATTACGGGACAGAGGATACTATTTCTTTATCTGTTCACCAACCATAAGATGCTGGTATGATCTTGAGGAGAGGGACATGAAACTGGCTGATATTCCTATGTGGGACGCCACCAGAGATTTCCTGTTAACAGACTTGGCTTACAGGATTGGCACAGGGCAGAATTACACCAATATGTTCTCAGTCGGGGACAATACAGACGCAGCAGGCATGACCAATGATGGTCGTTTAGATGACAAAAAGATGGACCCTAGAGAGAAATGGAACATTCTGATGAGAGACCTCAATAATGAAAAGCAGAGAAATCATGCCCTGTATAGTTCATTTTTACCCAGACACTCCGCTGCTATGCTTAATCAGGGGCAGATGCCTAAAGGGGACTACTACCCGGATGTTACGGCTCTATTTTGTGATATTGTCCACTTTCTGCAGATTATTGGAAGTTCTAAGCCAGGTGAAGTTGTAAACCTCCTAAACTGCCTTTACTCTCAGTTTGATAGAATAACAAGGGTACATGATACATACAGAGTTGAGTCTATCGGTGACGCTTACTTTGTTGTCTCTGGAGTACCAGACAAAGTCCATAACCATGCAGAAAGAATAGCAAACACGGCTCTTGGAATTATGTATGTGTCCCAGGAAATCACTTCACCTCTGAATGGAGACAAAATTCAGATAAGGATAGGGATACACACAGGATCTGTGGTTGGTGGTGTAGTAGGAACAAAGATCCCCAGATATTTCGTACTGGGTGAAACACCGGTTGTTGCCTCAAAAATGGAAAGTCATGGCGAACCGGGGAAAATCCATATTAGTCCATCAACATACAGGGCACTGAAAGGCAAAGGATATGCTATGGAGGAAAGGGGGAAAATTGAGTTGAAAGGATACGGAACTCTGGGAACCTACTTTTTGTCAGCAAATGAAAATGCTTCAACAGAAGATCTGATTGGACGATCTAAACTGTCCAATCAGGAGGTATCTTATATCAATGAAGGCAAAGACAAGAAGTCAACAGGAGGAAGTAAGCCAGTGACAGCAGAGTCTGAATGTATAGCATTTAACTATTGA

Transcript

Bpl_scaf_54411-6.19

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00211	Guanylate_cyc	Adenylate and Guanylate cyclase catalytic domain	Domain	Interproscan
PF07700	HNOB	Haem-NO-binding	Domain	Interproscan
PF07701	HNOBA	Heme NO binding associated	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001054	Domain	Adenylyl cyclase class-3/4/guanylyl cyclase	Interproscan
IPR011644	Domain	Heme NO-binding	Interproscan
IPR011645	Domain	Haem NO binding associated	Interproscan
IPR024096	Homologous_superfamily	NO signalling/Golgi transport ligand-binding domain superfamily	Interproscan
IPR029787	Homologous_superfamily	Nucleotide cyclase	Interproscan
IPR038158	Homologous_superfamily	H-NOX domain superfamily	Interproscan
IPR042463	Homologous_superfamily	Haem NO binding associated domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45655	GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004383	Molecular Function	guanylate cyclase activity	Interproscan
GO:0006182	Biological Process	cGMP biosynthetic process	Interproscan
GO:0008074	Cellular Component	guanylate cyclase complex, soluble	Interproscan
GO:0009190	Biological Process	cyclic nucleotide biosynthetic process	Interproscan
GO:0019934	Biological Process	cGMP-mediated signaling	Interproscan
GO:0020037	Molecular Function	heme binding	Interproscan
GO:0035556	Biological Process	intracellular signal transduction	Interproscan
GO:0070482	Biological Process	response to oxygen levels	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12319	GUCY1B; guanylate cyclase soluble subunit beta	EC:4.6.1.2	Purine metabolism	ko00230	PMID: 28812709
			cGMP - PKG signaling pathway	ko04022	PMID: 28812709
			Gap junction	ko04540	PMID: 28812709
			Platelet activation	ko04611	PMID: 28812709
			Oxytocin signaling pathway	ko04921	PMID: 28812709
			Renin secretion	ko04924	PMID: 28812709
			Vascular smooth muscle contraction	ko04270	PMID: 28812709
			Salivary secretion	ko04970	PMID: 28812709
			Long-term depression	ko04730	PMID: 28812709
			Circadian entrainment	ko04713	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_54411-6.19 global RNA-seq network