Gene detail

Detailed information of Bpl_scaf_54270-1.8 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_54270-1.8	FIBROUS SHEATH INTERACTING PROTEIN 1	Bpl_scaf_54270	216416	236527	+

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_54270-1.8

ATGAATGGACATCGTGATAATCCAAACTCACATCTAGACATGGATCTTCATTTAAACCTTGAATCATTGGATACAGTCACAGGAAAGTCCCAATCTAATTCTGAAATGTCCGATGAATCTTCAGAATGGGAAAATGACCACATTCTAATGAACGTGGGGCCCAAGAAAGAAAAATTACCAGATGAACTGTCGCTTAATTTAGCAGGAATTAATGGTGCTGAAGGCAGTGATAATGAAAAACAACAAGGAGGACTTCTACCATATGAGGATGGAATTGACGTTGACAGTGACGAAGAAAAAGAAATTATGAACGAAATCAAAAATGAAATACAGCAACAGATCAGAGGAGAGATGAAATCTGAACTAGAAATGTATCAATATAAAATGGCAGCATTAGAAAATGGGAGTGTCAGAGGGGAAGATGCAAATAAAGAATCGGGTCTGGAAGATATAGATCCAAAGATGAAAGAGGCCATATTAAAGATGAGAAAACTTGATAGAATTCTATCTAAAAAGATAAAAAGAGAAAAGGAAGTTAAAAAAGACAGAATCATCCTTGAAAGGAGAATAAAAGCAGAACTGGAGGCTATAAATCAACAGAACACAGATGCCAAGTTAAATACAGATAAATTTCTGGCCCTTACACTGCCACCTAGTCATAATGAAGGCGTTGATATGTCAGACATACCAGATGAACCTGTCTTTGCCACACAGCTGAATGAACAAGATTATTCTGATTTAAAATCAGGTGGTGCTAAATCTAAAGAAAACTCCAACAGAGGTGAGACAAAATCAGCTACAAGTACAGACAGAGACACTATGACTGCTAGTGATACAACCTCTATTAATGGAAGCCAAAAAAGTTCAAAGAAACACAAACGAAAAAAAGATTTCATCAAACGAAATAAAGAGTTGGCTGCAGATGCAGAGAATCCAATACCTATGACCCAGGAGGAGAAAGTTAGGATAGAATCGCTTCTAGGTGACCTGGATGAATTACCAGAAATCACGGGGGATGAAGATATTGATGAAGTGAGAATTCCCAGGGGTCAATTAGCAGTTCACTATGGCGAAGGATTTGTACCTGACGATGACGACCAGATATCGTTGCGGGGTATTGAATCCAGACTAAAGGAGATAATGCCTCCACAAGATTATGAATCAATTATGCATACACCAACAACACCTCAGTCATATAAGTTATTTACACCTGTATCAATCAAAACCAACTTGGATATAGAACATTTTGGTGAGAAAGCCTTGTTAGAATATAAAGATCAGCGAGAATTGAGAGAGAGGTTACATATTGTTGACGAACAGTTGTCTAATCTACACAGCCGTGATGAAGATGAACTCTCAGAAAGTTACTCATCTGGCATATTACCTAAGCATCAACTAAATGACTTGCTTGACCAATGTGCTATGTCATTATCTAGGACATCTTGTGGTGATTTATCATCAAGAATATCTGAAGCAGAATCAGAATCCACATTATGTAACTCAACAGAATCAACACCAAGAACACCCCACTCTGCCAGGGAACTTTTAATGGAAAATCCACCGAAATTATCAGATGAAGTTCTACAAAGACTGCTGTCTGAAGCCCAAACAGCTCTTCCCTCTAGATTATCTACCCTTAGAGAAGAAGATGAAGATGATGTAGATGTGGAAAAGACTTATGTTGAAGATGTATCGGCTCGTGTTGATCGCTGGAGAAAAATAAAAGAGAATCACAACACTGACAATGAACTGACGACAGAAATATCTAATGTTTTATCTGAAGATGCCGAAAGTGCGCGCACGGAAAGATGGAAAAGGATACAAGATTTATTATTGAGTATTGACAATACAGAAGACAACGAAAGTAACATTAGTAAAACTGACCGTCCTTATACTGAACGCCCCAACAATGAACCTAGTCAAGTGATGGATACATCACAAGATTTCACTGCAAGAACTGATGATGAAAGTGAAGACTTTGAACCTAGTAAAAATTATCCAAATGAAAATTTGGACCCTGTCAATTCAATAAATGGACCCTTGTTTCATAGAAAAAATCATCAAACATCTAAAAATAATGACTATTTTGGTTTTGAAAGAGGAAATTCTATAAACAGTGATTCTTCTAAAACTTCATTTTTACCAGAAATTAATAGATCTGGTAGTCTTGTTTCACAGGATTTGAATTTCAACAGAATATCTAGTGCTCAGAGTGGAAGAAGTTCTGCCTCTTCAATACGATCATATAATGCTAAACAGCAAGACTCTATAGAAATAATGTCTATTGATGGAGAATGCTTAACTCCTAAACCTCCAGACACAGAGAGACCATCTAGTAGTAAATCACGGACTGTTACACCTTTAAATAGATAA

Transcript

Bpl_scaf_54270-1.8

GATATTTTAACATTCCAAAAATGGACGACAATAGCAAGTGGTTGTCAAGAAATAGTTGTATTCCATCAGTATAAACCCTTTCAACATTATATTTACAAAAAACATAAAAAAAAGTAGAAGTAGAAAAATGAATGGACATCGTGATAATCCAAACTCACATCTAGACATGGATCTTCATTTAAACCTTGAATCATTGGATACAGTCACAGGAAAGTCCCAATCTAATTCTGAAATGTCCGATGAATCTTCAGAATGGGAAAATGACCACATTCTAATGAACGTGGGGCCCAAGAAAGAAAAATTACCAGATGAACTGTCGCTTAATTTAGCAGGAATTAATGGTGCTGAAGGCAGTGATAATGAAAAACAACAAGGAGGACTTCTACCATATGAGGATGGAATTGACGTTGACAGTGACGAAGAAAAAGAAATTATGAACGAAATCAAAAATGAAATACAGCAACAGATCAGAGGAGAGATGAAATCTGAACTAGAAATGTATCAATATAAAATGGCAGCATTAGAAAATGGGAGTGTCAGAGGGGAAGATGCAAATAAAGAATCGGGTCTGGAAGATATAGATCCAAAGATGAAAGAGGCCATATTAAAGATGAGAAAACTTGATAGAATTCTATCTAAAAAGATAAAAAGAGAAAAGGAAGTTAAAAAAGACAGAATCATCCTTGAAAGGAGAATAAAAGCAGAACTGGAGGCTATAAATCAACAGAACACAGATGCCAAGTTAAATACAGATAAATTTCTGGCCCTTACACTGCCACCTAGTCATAATGAAGGCGTTGATATGTCAGACATACCAGATGAACCTGTCTTTGCCACACAGCTGAATGAACAAGATTATTCTGATTTAAAATCAGGTGGTGCTAAATCTAAAGAAAACTCCAACAGAGGTGAGACAAAATCAGCTACAAGTACAGACAGAGACACTATGACTGCTAGTGATACAACCTCTATTAATGGAAGCCAAAAAAGTTCAAAGAAACACAAACGAAAAAAAGATTTCATCAAACGAAATAAAGAGTTGGCTGCAGATGCAGAGAATCCAATACCTATGACCCAGGAGGAGAAAGTTAGGATAGAATCGCTTCTAGGTGACCTGGATGAATTACCAGAAATCACGGGGGATGAAGATATTGATGAAGTGAGAATTCCCAGGGGTCAATTAGCAGTTCACTATGGCGAAGGATTTGTACCTGACGATGACGACCAGATATCGTTGCGGGGTATTGAATCCAGACTAAAGGAGATAATGCCTCCACAAGATTATGAATCAATTATGCATACACCAACAACACCTCAGTCATATAAGTTATTTACACCTGTATCAATCAAAACCAACTTGGATATAGAACATTTTGGTGAGAAAGCCTTGTTAGAATATAAAGATCAGCGAGAATTGAGAGAGAGGTTACATATTGTTGACGAACAGTTGTCTAATCTACACAGCCGTGATGAAGATGAACTCTCAGAAAGTTACTCATCTGGCATATTACCTAAGCATCAACTAAATGACTTGCTTGACCAATGTGCTATGTCATTATCTAGGACATCTTGTGGTGATTTATCATCAAGAATATCTGAAGCAGAATCAGAATCCACATTATGTAACTCAACAGAATCAACACCAAGAACACCCCACTCTGCCAGGGAACTTTTAATGGAAAATCCACCGAAATTATCAGATGAAGTTCTACAAAGACTGCTGTCTGAAGCCCAAACAGCTCTTCCCTCTAGATTATCTACCCTTAGAGAAGAAGATGAAGATGATGTAGATGTGGAAAAGACTTATGTTGAAGATGTATCGGCTCGTGTTGATCGCTGGAGAAAAATAAAAGAGAATCACAACACTGACAATGAACTGACGACAGAAATATCTAATGTTTTATCTGAAGATGCCGAAAGTGCGCGCACGGAAAGATGGAAAAGGATACAAGATTTATTATTGAGTATTGACAATACAGAAGACAACGAAAGTAACATTAGTAAAACTGACCGTCCTTATACTGAACGCCCCAACAATGAACCTAGTCAAGTGATGGATACATCACAAGATTTCACTGCAAGAACTGATGATGAAAGTGAAGACTTTGAACCTAGTAAAAATTATCCAAATGAAAATTTGGACCCTGTCAATTCAATAAATGGACCCTTGTTTCATAGAAAAAATCATCAAACATCTAAAAATAATGACTATTTTGGTTTTGAAAGAGGAAATTCTATAAACAGTGATTCTTCTAAAACTTCATTTTTACCAGAAATTAATAGATCTGGTAGTCTTGTTTCACAGGATTTGAATTTCAACAGAATATCTAGTGCTCAGAGTGGAAGAAGTTCTGCCTCTTCAATACGATCATATAATGCTAAACAGCAAGACTCTATAGAAATAATGTCTATTGATGGAGAATGCTTAACTCCTAAACCTCCAGACACAGAGAGACCATCTAGTAGTAAATCACGGACTGTTACACCTTTAAATAGATAATACAGTCAAACTTGCCTTAGCGATCACCTTGA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15554	FSIP1	FSIP1 family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026246	Family	Fibrous sheath-interacting protein 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22012	FIBROUS SHEATH INTERACTING PROTEIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for Bpl_scaf_54270-1.8 global RNA-seq network