Gene detail

Detailed information of Bpl_scaf_54046-3.5 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_54046-3.5	SOLUTE CARRIER FAMILY 35 MEMBER B	Bpl_scaf_54046	299719	312830	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_54046-3.5

GTTGCTTGTGAGGCTAACATAGTTGAGGATTGTTTTTTTCATATATTTGTTAGAATAACTTGTATAGTAAAGGGCAACAGCTGTTGCCATGATGTGGTTTGTTAGTCTTGTTATCATCAATATCATCTTGCCATGTTGTCTTGGGGAAGAATCTGCAGCAGCAGATGGCAGCCATTGGATGGATTTCTGGGTAGTCCGACTACTTTTGAATCTGCTAGGCTATGCCACAATATTTGTTCCTGGTTTTTTGCTGATAAGATACTTAAGGAGCATCAGATATAATGAAACTGCTGGCCTTTCATCAGAAAACAGTGATTTGACTGATAGCAATAACAAAAATTCAATATGGGAGGTGGGGCATTCATACACACCAACATGTTTGTCACAACTAGTCAGGCAGTGTGTATTTGGTAATGAAGATAAAGTAAGCTTAGAACAGCTAGAAGAAGGAGGAAGTACTGCTGTTATAATAGAATCTCAAAATCCTGTTTCTAAAATATTGACCTTGGTGTTTTGTATTGGTGGTCTACAAGGAGCATATCTAACATGGGGTGTTTTACAAGAAAGAATTATGACATTCGAATATGGAAAAGTGGACGAGCAGCAAGGGGAATTTTTTAGAAATTCACAATTTTTAGTCTTCATCAATAGAATACTGGCATTTATGATCGGAATGACCGTCATATTTCTACAACGACAACCTCACCATACGACTCCATTGTATAATTACTCGTTCAGTTCATTCTCAAACATCATGAGCAGTTGGTGCCAATACGAAGCTCTCAAATTTGTTAGCTTTCCTACACAAGTCTTAGCCAAAGCGTCTAAAGTCATTCCCGTTATGTTAATGGGAAAGGTCGTATCAAAGAGGACATACGAATATCATGAATACATTACTGCTTGCATGATTTCAGTTGGAGTAACGTTATTTTTATTAAATAGTGGTGACGTCACTAGACATAAAGGAAGTGTAACAACGATATCTGGCGTTATTCTTCTAGCAGGATACATGGGCTTCGACAGCTTTACATCTAATTGGCAGGGAGAACTGTTCAAACGTCACAAGGTTTCTTCCATTCAAATGATGACCGGTGTAAACATGTTTTCATGTTTACTGACCGGAGTCTCCCTTCTTGAACAAGGAGGTTTCTTCGACTCGTTTGCATTCATGGCTAGACATCACCTGTTCATTGCTCATGCAATTGTTTTAAGTCTTTGTTCTGCTTGTGGTCAGCTGTTTATATTTTACACCATTTCTCAGTTCGGTGCTGTTACGTTCACGATAATCATGACATTACGACAGGCTTTTGCCATCTTATTATCTTGTGTTATATATGGACACCCTGTAACGTGGATAGGATTATTTGGTATTGTAGTCGTGTTTATTGCTCTTTTTTTAAGAATTTATGCAAATCAACGTAAAAAATCTCAAAAGTCAATCGTCTCTAACAACTCCACATCATAGTTTCAATATTACAATAGTTCATATATTTGTTGGAATATTTTCTCCCGTGATAAATATATACAAATATTTTTTTATAAAGTTAAAAATATATATTTGCTTATTTAATATATATAGGAATAAAATTTCATTGTTAAGGTTTACGTTTTTTATGATAGGGGTATTTACGTAACTGTAGAGGTTTGAAAAATAGATCATTAAATAAATTATATTCAAAATAATTTCCCCAATCAAAAAAGAAAAAGTAGCCGTTTGAAAACTATAACTGTTTAACCTTTTTTTTCAGTTGTATTACAGCCATGATATAGCTGAAATATTACTAAAGTTGGCATTAAACACCAATCAATCAATTGTATTACAACATTTGAACTCCTAGTGTGGTGATTAATTCTCTAGTCAGTAGTGAGAGAGATATTTAAAATTGTAACTATTATCAATGTATTCACAGAATATACTCAAGGTGAAAAAGAGCAATATACATTTGTATTAGTTTTTGAGCATTGATAAATTAAACCAAAGATTATTGAAATTTCTTGGATATATTGTTTGAAGATGTTAGTACTATAATACAGTAATATATAATAACCTCAATAGATTAATTTGACAACATTGATACCACTCATAGGAGTGTCCTATCAATGTTGCAATATACCGGTATATCACACAAGTGCTATTGTGAAGGAAAAAAACTTTCTTGTGTATCAATTAATTGGTTGTTCATCAAGGTGTTAAATTTTTCCAAGATGATCTGTCCCTTTGAATAAATACAGTGCAATAGGTATTGTATTCATTTAAAGTGACATGTACAGATCATCTTGGGGGGGGGGGGGATAAATACCTTAAGAAACACCTTCTGATACACATAGGAAAGGTTTTATTTCCCTTTACAATAAGAAATCAGTACATGTAGAACATTATGATCAATATACAGAGGAGATCCTCTGTGTTTCTCTTGAAATTTGTAACTGATATTAAAATTTAACCAGTTTAAATGTATTACATGTACAATGTATATTACTGCACCATTTTTTTTTAATTTGGATATTCTCCACACAAAAAATCCTTGTACATGTATTTGAAGAAGAAAAAAATCAGTTGAATTATATTGTGCAATTTTTGTCTGTAAAGTTTATTATATATATTT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08449	UAA	UAA transporter family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013657	Family	SLC35B1-4/HUT1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10778	SOLUTE CARRIER FAMILY 35 MEMBER B	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0030173	Cellular Component	obsolete integral component of Golgi membrane	Interproscan
GO:0030176	Cellular Component	obsolete integral component of endoplasmic reticulum membrane	Interproscan
GO:0046964	Molecular Function	3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15276	SLC35B2, PAPST1; solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2	-	Transporters	ko02000	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_54046-3.5 global RNA-seq network