Gene detail

Detailed information of Bpl_scaf_52347-5.4 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_52347-5.4	SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL	Bpl_scaf_52347	481379	493419	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_52347-5.4

ACATGTGTTTGTGCCAATAGAATTTTAGTCCAAGAAGGGATTTATACAAAGTATGTACAGAAACTAGCAGAGGTCATGGAAAGGGACCTGAAAGTTGGTGATGGATTTGTGTCTGGTACAACACAAGGTCCTTTGATCAATGAAAATGCTGTCAATAAGGTTGATGCTGTGAAAAGAGGTGCTAAATTAGTATTAGGTGGTAAAAAGAAGGGAGGTAACTTTTACTCCCCTACTCTACTACAGGATGTAACATTAGACATGAAATGTGCCCAGGAGGAAATATTTGGTCCTGTTGCTGCAGTACACAAGTTTAAAACAGAGGAGGAAGCTGTTAGAATAGCAAATGCTACAACTTCAGGCTTAGGAGGTTTGTTTAAAACAGAGGAGGAAGCTGTTAGAATAGCAAATGCTACCACTTCAGGCTTAGCAGGATATTTCTTTTCTCAAAACATAAGCCAAGTATGGAGAGTAGCTGAGAAACTGGAGTATGGTCTTGTAGGTGTCAATGAAGGAGTATTCTCCATGACTGAGGCTCCTTTTGGGGGCTGGAAAGAATCAGGACTTGGTTCAGAAGGCAGCAAATATGGAATAAATGAATATTTAGAAATTAAATATGTTTGTATGGGAGGTTTATAGTTTTGTAGATTTAATAGATTTTTTTACATGGAAAATTGTATTCAGTGTAATTGGAAATTTTAAACTTTGTTTTTACAGATATGAGGAAGTCAGTTGTGTGACATGTTTTAGTTTATACAATAAATATCTAATATACCAATATAGATTTATTGTGGAGTATGTGTATTAATCTTATACAGTTAGGGTTGATCCTTAAAGTGTTTACATGTAGATAAAATAGTGCAGATACATCCTTCATGTACATGTATGAACAACAAGTGGATCTAATGGGAGGGTTCCAGGATTTTGAACACCCACCCCTCTTTTCAGATAAATTGTAAAAAAAAAAAAAAAGGATCTTATATAAGGCCATACAAAGTTAATTTCTTGGTTCTCAGGCCCGCCCGCATGTGGAAATTCGTCGCCGCATTGACAATTTTTTAGTAAAAAAAAAATGTTTAAATACGGTAGCGCTGTCCGTACGGAAAAAACAACCGCATCCGTTTTTCTCTTATATCGCGTGGTCGGTGAAACGCTTTAAAACGCATCATGCTTAAATGAGATTTAAAGCATCGTTATGACAATGTATAAATAAAAAACGTATTTCCGTTTGACATTTAGACAAAATGTCAATCGTTTCTGTGCAAATTCGGCACAAATGTTTGCCAGTTTTACCAGGAAACATAATAGGGGGCTTCTCCGAAGCTTGTACCTTATTGGAATTGTTTACGGAGATAAAAAATGGTACGTTGGGACCAGCGGATTGGACGTTTCCATAAAAATTAACCACTTGTGATGTTTCTGCCACCATCGGAAGAAATAAAATTGAAATTTTCAATAAAGTAATGAAAAGATTTATACATTGCCATATTTTTCACAAAAAAAAGAAGAAAAAATGCCTCCCTCATCACTTTTTACAGCAGTAAAAGGATAACAAAAAATGCTGCCCTCCCTCATCAATTTTGACAAAAAAGGGCCTGAGAACCAAGTAATTAACTTTGCATGGCCTAAAGAAAAATAAAGTATTACTGTGTAATTACTTCGATTGATAAATTATGCCAAAAATAGCATGGAACCCCCTCCTCCCACTGCCACCTTTTGAGAAAACCGTGGATCTGCCCCCCAAAACAGTACCAGTAGTCTCCTCATGGTGAATGTTAATTGGGTACTTTATACTGATTTATATGTTAAATTTTTGAAGAGGATAAGAAGAGTATTTAAATAATGTTTGAACTTTGCCTTTTCTTTTGGATAAAAATAATTTTATCTTCTTTAAACCATGGTTAATGACTACAGTAGCAATCAGTTACTTTATAATTATTTTATTGTCAATATATATATACAATTGAATTGGGAACAAGTTTTTTCAACTTACTAGTCTCTCTCCATACAAATACATTAATAACATAAATGAAACAAATCAAATGACATCAAATGTCAAGGTTATATCAATTATATTTAATAAACTTAAGCAAAATTATATCAAACTAAGTCAGTAAGTGTACATATTAAATATTGTTTTAATATTTAACAGAAGAAAATAGAGGGAAAAAAGGAGAGGGGTAAAAGTAATAAATTGAGACACCTCTGAGTGATAGTTATTATTATTACAGAGATTATATGTTACTGTTTCTCCAATAGTAGTTGGCAAACAGTTATATAAGTATGGGAGAGTCATACTATTTTTCAATTTTATAAAATACATTTAGTTTCGTAGATTTTCGACAGTCTTCCAGTTTTGTTTGTAATACTGCAATATTGTGTAATGAAGCAGGGAGTAATGGGGATAATTTTGGACAAAGCTACCTTTCTTTTTACATTTACATAATTTTTGTCCTTCTGTTTTTTCCATCAATCATGTTCTGAATAACCCTTTATTTTACAAAATAATTTTTGAAAGTGTTAAAGATTTATTTTCTTATACATGTAATACAGTAAAATGTCCTTGTTAGAAATGAGATATAATGAACATATTATGAAACCACCACTTGTATTTGAAACTTTTTAAATCTTTAGTAGTAAGATTTAGGATAATGATGTAAATGAACATGAGATACTATCCAACTTAACACTTGACAGAGATTGAAGTAGAGGAATGACACTTGTTGCATGTATTTTTAAACTTAGATATTTTATTTATATACAGGTTGTAAATTGATATTTTACTTTAAGGCTGTATGAAAGGGTGTTTGTTATTGTTTTTTTTTTTTTGATGATTCCCATAATGAATTGTGACATTATATATTTTATTGATGAAAATTGC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00171	Aldedh	Aldehyde dehydrogenase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015590	Domain	Aldehyde dehydrogenase domain	Interproscan
IPR016161	Homologous_superfamily	Aldehyde/histidinol dehydrogenase	Interproscan
IPR016163	Homologous_superfamily	Aldehyde dehydrogenase, C-terminal	Interproscan
IPR050740	Family	Aldehyde Dehydrogenase Superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43353	SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004777	Molecular Function	succinate-semialdehyde dehydrogenase (NAD+) activity	Interproscan
GO:0006807	Biological Process	obsolete nitrogen compound metabolic process	Interproscan
GO:0009450	Biological Process	gamma-aminobutyric acid catabolic process	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0016620	Molecular Function	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for Bpl_scaf_52347-5.4 global RNA-seq network