Gene ID | Annotation | Scaffold | Start | End | Strand |
---|---|---|---|---|---|
Bpl_scaf_52346-1.13 | DNA HELICASE RECQ FAMILY MEMBER | Bpl_scaf_52346 | 59348 | 63784 | - |
CDS | |||||
Bpl_scaf_52346-1.13 | |||||
Transcript |
Bpl_scaf_52346-1.13 |
Protein |
Bpl_scaf_52346-1.13 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF00271 | Helicase_C | Helicase conserved C-terminal domain | Domain | Interproscan |
PF16124 | RecQ_Zn_bind | RecQ zinc-binding | Domain | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR001650 | Domain | Helicase, C-terminal domain-like | Interproscan |
IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
IPR032284 | Domain | ATP-dependent DNA helicase RecQ, zinc-binding domain | Interproscan |
IPR036388 | Homologous_superfamily | Winged helix-like DNA-binding domain superfamily | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR13710 | DNA HELICASE RECQ FAMILY MEMBER | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0000724 | Biological Process | double-strand break repair via homologous recombination | Interproscan |
GO:0005694 | Cellular Component | chromosome | Interproscan |
GO:0005737 | Cellular Component | cytoplasm | Interproscan |
GO:0006268 | Biological Process | DNA unwinding involved in DNA replication | Interproscan |
GO:0006281 | Biological Process | DNA repair | Interproscan |
GO:0006310 | Biological Process | DNA recombination | Interproscan |
GO:0009378 | Molecular Function | four-way junction helicase activity | Interproscan |
GO:0032508 | Biological Process | DNA duplex unwinding | Interproscan |
GO:0043138 | Molecular Function | 3'-5' DNA helicase activity | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
K10899 | RECQL; ATP-dependent DNA helicase Q1 | EC:5.6.2.4 | DNA repair and recombination proteins | ko03400 | PMID: 28812709 |
1. Expression trend for Bpl_scaf_52346-1.13 global RNA-seq network |