Gene detail

Detailed information of Bpl_scaf_50780-1.17 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_50780-1.17	INTRAFLAGELLAR TRANSPORT PROTEIN 81 HOMOLOG	Bpl_scaf_50780	176453	197765	+

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_50780-1.17

ATGAGTGAACAGTTGAAGTTCATCATACAGGAGTTGAAGAAAGAACCCTTCAACAAACCTTATAACTTAATATCATTTGACTCATTAGAACCATTACAGTTACTTCAAGTACTTAATGATGTTATAGCTATTATCGATCCTAAGCAAAAAATAGATATTCGAGAGGAAAGTTCAGATCAGACAGCCATTAGAATATTTACAACTCTACGTGTACTGAAGTACAAACCCCCTAATGAGTCAACATTTAGAGCAGGACTGGTACAAGCTGATAAGCTGGTGATATATCCTATATTAGAATGGTTGTTGAAAAGGGTACCAGAGCTGCAGAAGAGGGCTTACTTAGCCAGGTTTCTGGTCAAAATAGATGTACCACCAGAAATTATGGCCGAGGATCAAATTCCAGAGCTGTTTGCTCAGTATGAAGAGCTTATGGATCAGTTTAAAGATCTGCACAAACAAGCTGAGAAATTAAGAAGCTCGGGATTTAATACTGGAGAAATCAGAAAAGATATCTCAAATATGGAAGATGAAAAGGAACAACTGAATAAAAGAATTGAGAGGTTAAAACGCAAGGTGGAGAGTCATCCTAATTCTCAAACTATGATGAACGTTGCTAGAAATCTACGTCTTGAAAGAGACAAAGAAAAAAAGTTGGCAGAGCAGAGACAAGAGCAGGCAACTCTGATTCAGCATGAAGAACAGAAGATTAGAAGACTTCAGCAGCAACTACATGATCAAAGACAGACCAGTGTAGGAGCTAACCCAGATACTCTCCTACAGAGACTGGAAGAAGAGACTAGGACCAACAAATACATTGTTACGGAAAGGTTACCTAAAGATATATCTGGACGTCGTAAAACCTTACAAGATTTACAGCGTGTTGTGGCAGAACCAGCAATGGGTCATTCAGATTTGGATCAACTAAACTCTCAGATTTCTGAATTGAATTCTGAGATAAATCAGCTAATGGAGAAGAGAATGCTGGCGAGTCGAGATCCTGATGATAAATCTAATCTCTTTAGACAACAGGCTTCTATAATTGCCCATAAGAAGAATGCAGCATTTGAGAGCTACAGGAGCTTAAGAGATGAGTATAACCATATCCAACAAGACCTGGATCAGAAACGAGAAATGGTGAAAGAACAGGGAGGTGGAGAAGTTTTAAAGGGTGAAGATTTTAAGAGATATGTCAACAAACTGAGAAGTAAGAGTACAATTTATAAAAAGAAAAGACAAGAAATAGCTGAGATAAGAGCTGAATTAGGGGTCTTATCAAGAACTGAGGAAATCCTTAGACAGAGAGATGATAATATTAACATGCAACTGTCTGCTTTAGAAAATAAGAAAGGTGTGTCTGGTTACAGACAAACACAGGAAAATCTGGAAAAAGTGTCTGCCGTCAAGAGTGAATATGATGACCGAAAAGGAAAGACATTAGAAGATATGTCTGAAATGGTTGGCCGACTGACTCGTAAGATAGCAGATAAGAAAGGAGCATTGGCTCCAATTATTAAGGAGTTAAGACCAATGAGACAGAGAAATCAAGAATTGACATCAATTTATGAGGAGAAGAAACATGCTTATGATACAGCATCAGCTGGAATGGAGAGCAATATGGCTAAATTAGAACAGGAGGTGAAGGGTTATCACGAGGAATGTAAACAAGAAGAGTCCAGATATCACTACTTAAACTGTATGATCAGAATGATAGAGATGCAACAACAGAAAGTGGCTGATGAAATGAAAGCTTACACCTCCTCTGATCCTTATACAAGAAAGAAAACATTCAGAGAATTGTACCAACGAAAAGTTCAGGAGCAGGAAAATCTTGGTAAGGGTCTACGAGAACAACAGAAAACTGTCAGAGAAAGCCATGGTCCAAGTATGTCACAAATGAAAATGTGGAAAGATGTAGAACGACTTTTAGAATGTAAACGACAGTGTTTTGAACGTAATGTAGGGATGACTGCTCAAGGAATATCAAGCTATGGGGAAGCACCACCAGCAGTTCTAGAAGATGATCGTCTTGTACTGTGA

Transcript

Bpl_scaf_50780-1.17

GGAAGTTGTAACAAATTCCTGTGAATTCGGATTTTAATGGACAATTTTGCATAGCAGGTCAATAAAAATTATTCACGATGAGTGAACAGTTGAAGTTCATCATACAGGAGTTGAAGAAAGAACCCTTCAACAAACCTTATAACTTAATATCATTTGACTCATTAGAACCATTACAGTTACTTCAAGTACTTAATGATGTTATAGCTATTATCGATCCTAAGCAAAAAATAGATATTCGAGAGGAAAGTTCAGATCAGACAGCCATTAGAATATTTACAACTCTACGTGTACTGAAGTACAAACCCCCTAATGAGTCAACATTTAGAGCAGGACTGGTACAAGCTGATAAGCTGGTGATATATCCTATATTAGAATGGTTGTTGAAAAGGGTACCAGAGCTGCAGAAGAGGGCTTACTTAGCCAGGTTTCTGGTCAAAATAGATGTACCACCAGAAATTATGGCCGAGGATCAAATTCCAGAGCTGTTTGCTCAGTATGAAGAGCTTATGGATCAGTTTAAAGATCTGCACAAACAAGCTGAGAAATTAAGAAGCTCGGGATTTAATACTGGAGAAATCAGAAAAGATATCTCAAATATGGAAGATGAAAAGGAACAACTGAATAAAAGAATTGAGAGGTTAAAACGCAAGGTGGAGAGTCATCCTAATTCTCAAACTATGATGAACGTTGCTAGAAATCTACGTCTTGAAAGAGACAAAGAAAAAAAGTTGGCAGAGCAGAGACAAGAGCAGGCAACTCTGATTCAGCATGAAGAACAGAAGATTAGAAGACTTCAGCAGCAACTACATGATCAAAGACAGACCAGTGTAGGAGCTAACCCAGATACTCTCCTACAGAGACTGGAAGAAGAGACTAGGACCAACAAATACATTGTTACGGAAAGGTTACCTAAAGATATATCTGGACGTCGTAAAACCTTACAAGATTTACAGCGTGTTGTGGCAGAACCAGCAATGGGTCATTCAGATTTGGATCAACTAAACTCTCAGATTTCTGAATTGAATTCTGAGATAAATCAGCTAATGGAGAAGAGAATGCTGGCGAGTCGAGATCCTGATGATAAATCTAATCTCTTTAGACAACAGGCTTCTATAATTGCCCATAAGAAGAATGCAGCATTTGAGAGCTACAGGAGCTTAAGAGATGAGTATAACCATATCCAACAAGACCTGGATCAGAAACGAGAAATGGTGAAAGAACAGGGAGGTGGAGAAGTTTTAAAGGGTGAAGATTTTAAGAGATATGTCAACAAACTGAGAAGTAAGAGTACAATTTATAAAAAGAAAAGACAAGAAATAGCTGAGATAAGAGCTGAATTAGGGGTCTTATCAAGAACTGAGGAAATCCTTAGACAGAGAGATGATAATATTAACATGCAACTGTCTGCTTTAGAAAATAAGAAAGGTGTGTCTGGTTACAGACAAACACAGGAAAATCTGGAAAAAGTGTCTGCCGTCAAGAGTGAATATGATGACCGAAAAGGAAAGACATTAGAAGATATGTCTGAAATGGTTGGCCGACTGACTCGTAAGATAGCAGATAAGAAAGGAGCATTGGCTCCAATTATTAAGGAGTTAAGACCAATGAGACAGAGAAATCAAGAATTGACATCAATTTATGAGGAGAAGAAACATGCTTATGATACAGCATCAGCTGGAATGGAGAGCAATATGGCTAAATTAGAACAGGAGGTGAAGGGTTATCACGAGGAATGTAAACAAGAAGAGTCCAGATATCACTACTTAAACTGTATGATCAGAATGATAGAGATGCAACAACAGAAAGTGGCTGATGAAATGAAAGCTTACACCTCCTCTGATCCTTATACAAGAAAGAAAACATTCAGAGAATTGTACCAACGAAAAGTTCAGGAGCAGGAAAATCTTGGTAAGGGTCTACGAGAACAACAGAAAACTGTCAGAGAAAGCCATGGTCCAAGTATGTCACAAATGAAAATGTGGAAAGATGTAGAACGACTTTTAGAATGTAAACGACAGTGTTTTGAACGTAATGTAGGGATGACTGCTCAAGGAATATCAAGCTATGGGGAAGCACCACCAGCAGTTCTAGAAGATGATCGTCTTGTACTGTGATAACATATTAGATCTAATGTTAGAGACTAAATTTATTTTGTAACGTCTTTTTTTATATTGTATTTTCTAGTATGAAGCTTATGAAAGAACATTCCTATTTACTTATCTCCGTCCATTAAATCTTTTATGATTTGTT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18383	IFT81_CH	Intraflagellar transport 81 calponin homology domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029600	Family	Intraflagellar transport protein 81	Interproscan
IPR041146	Domain	IFT81, calponin homology domain	Interproscan
IPR043016	Homologous_superfamily	IFT81, N-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15614	INTRAFLAGELLAR TRANSPORT PROTEIN 81 HOMOLOG	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005813	Cellular Component	centrosome	Interproscan
GO:0005929	Cellular Component	cilium	Interproscan
GO:0015631	Molecular Function	tubulin binding	Interproscan
GO:0030992	Cellular Component	intraciliary transport particle B	Interproscan
GO:0042073	Biological Process	intraciliary transport	Interproscan
GO:0060271	Biological Process	cilium assembly	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K19677	IFT81; intraflagellar transport protein 81	-	Cilium and associated proteins	ko03037	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_50780-1.17 global RNA-seq network