| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_49402-1.10 | PARTNER OF XRN-2 PROTEIN 1 | Bpl_scaf_49402 | 160770 | 167812 | + |
| CDS | |||||
| Bpl_scaf_49402-1.10 | |||||
| Transcript |
| Bpl_scaf_49402-1.10 |
| Protein |
| Bpl_scaf_49402-1.10 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00035 | dsrm | Double-stranded RNA binding motif | Domain | Interproscan |
| PF01424 | R3H | R3H domain | Domain | Interproscan |
| PF01585 | G-patch | G-patch domain | Family | Interproscan |
| PF11952 | XTBD | XRN-Two Binding Domain, XTBD | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000467 | Domain | G-patch domain | Interproscan |
| IPR001374 | Domain | R3H domain | Interproscan |
| IPR014720 | Domain | Double-stranded RNA-binding domain | Interproscan |
| IPR021859 | Domain | XRN2-binding (XTBD) domain | Interproscan |
| IPR036867 | Homologous_superfamily | R3H domain superfamily | Interproscan |
| IPR053312 | Family | Partner of xrn-2 protein 1 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR48342 | PARTNER OF XRN-2 PROTEIN 1 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for Bpl_scaf_49402-1.10 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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