| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_49378-7.19 | TYROSYL-TRNA SYNTHETASE | Bpl_scaf_49378 | 787263 | 815425 | + |
| CDS | |||||
| Bpl_scaf_49378-7.19 | |||||
| Transcript |
| Bpl_scaf_49378-7.19 |
| Protein |
| Bpl_scaf_49378-7.19 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00579 | tRNA-synt_1b | tRNA synthetases class I (W and Y) | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001309 | Domain | Peptidase C14, p20 domain | Interproscan |
| IPR001412 | Conserved_site | Aminoacyl-tRNA synthetase, class I, conserved site | Interproscan |
| IPR002305 | Family | Aminoacyl-tRNA synthetase, class Ic | Interproscan |
| IPR002307 | Family | Tyrosine-tRNA ligase | Interproscan |
| IPR014729 | Homologous_superfamily | Rossmann-like alpha/beta/alpha sandwich fold | Interproscan |
| IPR024088 | Family | Tyrosine-tRNA ligase, bacterial-type | Interproscan |
| IPR036986 | Homologous_superfamily | RNA-binding S4 domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11766 | TYROSYL-TRNA SYNTHETASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000166 | Molecular Function | nucleotide binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0004197 | Molecular Function | cysteine-type endopeptidase activity | Interproscan |
| GO:0004812 | Molecular Function | aminoacyl-tRNA ligase activity | Interproscan |
| GO:0004831 | Molecular Function | tyrosine-tRNA ligase activity | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0005739 | Cellular Component | mitochondrion | Interproscan |
| GO:0005829 | Cellular Component | cytosol | Interproscan |
| GO:0006418 | Biological Process | tRNA aminoacylation for protein translation | Interproscan |
| GO:0006437 | Biological Process | tyrosyl-tRNA aminoacylation | Interproscan |
| GO:0006508 | Biological Process | proteolysis | Interproscan |
| GO:0043039 | Biological Process | tRNA aminoacylation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K01866 | YARS, tyrS; tyrosyl-tRNA synthetase | EC:6.1.1.1 | Aminoacyl-tRNA biosynthesis | ko00970 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_49378-7.19 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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