| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_4844-2.18 | HELICASE WITH DEATH DOMAIN-RELATED | Bpl_scaf_4844 | 237084 | 263808 | - |
| CDS | |||||
| Bpl_scaf_4844-2.18 | |||||
| Transcript |
| Bpl_scaf_4844-2.18 |
| Protein |
| Bpl_scaf_4844-2.18 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00270 | DEAD | DEAD/DEAH box helicase | Domain | Interproscan |
| PF00271 | Helicase_C | Helicase conserved C-terminal domain | Domain | Interproscan |
| PF07679 | I-set | Immunoglobulin I-set domain | Domain | Interproscan |
| PF11648 | RIG-I_C-RD | C-terminal domain of RIG-I | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001650 | Domain | Helicase, C-terminal domain-like | Interproscan |
| IPR003599 | Domain | Immunoglobulin subtype | Interproscan |
| IPR007110 | Domain | Immunoglobulin-like domain | Interproscan |
| IPR011545 | Domain | DEAD/DEAH box helicase domain | Interproscan |
| IPR013098 | Domain | Immunoglobulin I-set | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR014001 | Domain | Helicase superfamily 1/2, ATP-binding domain | Interproscan |
| IPR021673 | Domain | RIG-I-like receptor, C-terminal regulatory domain | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR036179 | Homologous_superfamily | Immunoglobulin-like domain superfamily | Interproscan |
| IPR038557 | Homologous_superfamily | RIG-I-like receptor, C-terminal domain superfamily | Interproscan |
| IPR051363 | Family | RIG-I-like Receptor (RLR) Helicase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14074 | HELICASE WITH DEATH DOMAIN-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K12647 | IFIH1, MDA5; interferon-induced helicase C domain-containing protein 1 | EC:3.6.4.13 | RIG-I-like receptor signaling pathway | ko04622 | PMID: 28812709 |
| Measles | ko05162 | PMID: 28812709 | |||
| Influenza A | ko05164 | PMID: 28812709 | |||
| Hepatitis B | ko05161 | PMID: 28812709 | |||
| Herpes simplex infection | ko05168 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_4844-2.18 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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