| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_4784-1.12 | ACTIN | Bpl_scaf_4784 | 84784 | 107866 | + |
| CDS | |||||
| Bpl_scaf_4784-1.12 | |||||
| Transcript |
| Bpl_scaf_4784-1.12 |
| Protein |
| Bpl_scaf_4784-1.12 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00022 | Actin | Actin | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR004000 | Family | Actin family | Interproscan |
| IPR020902 | Conserved_site | Actin/actin-like conserved site | Interproscan |
| IPR043129 | Homologous_superfamily | ATPase, nucleotide binding domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11937 | ACTIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005885 | Cellular Component | Arp2/3 protein complex | Interproscan |
| GO:0030479 | Cellular Component | actin cortical patch | Interproscan |
| GO:0034314 | Biological Process | Arp2/3 complex-mediated actin nucleation | Interproscan |
| GO:0051015 | Molecular Function | actin filament binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K17260 | ACTR2, ARP2; actin-related protein 2 | - | Autophagy - yeast | ko04138 | PMID: 28812709 |
| Tight junction | ko04530 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_4784-1.12 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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