| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_47536-3.16 | PLATELET-DERIVED GROWTH FACTOR | Bpl_scaf_47536 | 398920 | 416859 | + |
| CDS | |||||
| Bpl_scaf_47536-3.16 | |||||
| Transcript |
| Bpl_scaf_47536-3.16 |
| Protein |
| Bpl_scaf_47536-3.16 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00341 | PDGF | PDGF/VEGF domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000072 | Domain | PDGF/VEGF domain | Interproscan |
| IPR029034 | Homologous_superfamily | Cystine-knot cytokine | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11633 | PLATELET-DERIVED GROWTH FACTOR | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005615 | Cellular Component | extracellular space | Interproscan |
| GO:0008083 | Molecular Function | growth factor activity | Interproscan |
| GO:0008284 | Biological Process | positive regulation of cell population proliferation | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0031954 | Biological Process | positive regulation of protein autophosphorylation | Interproscan |
| GO:0070851 | Molecular Function | growth factor receptor binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K05449 | VEGFC_D; vascular endothelial growth factor C/D | - | Ras signaling pathway | ko04014 | PMID: 28812709 |
| Rap1 signaling pathway | ko04015 | PMID: 28812709 | |||
| PI3K-Akt signaling pathway | ko04151 | PMID: 28812709 | |||
| Cytokine-cytokine receptor interaction | ko04060 | PMID: 28812709 | |||
| Focal adhesion | ko04510 | PMID: 28812709 | |||
| Pathways in cancer | ko05200 | PMID: 28812709 | |||
| AGE-RAGE signaling pathway in diabetic complications | ko04933 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_47536-3.16 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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