Detailed information of Bpl_scaf_47521-1.5 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_47521-1.5CLATHRIN HEAVY CHAIN RELATEDBpl_scaf_4752181234120016+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00637ClathrinRegion in Clathrin and VPSRepeatInterproscan
PF01394Clathrin_propelClathrin propeller repeatRepeatInterproscan
PF09268Clathrin-linkClathrin, heavy-chain linkerRepeatInterproscan
PF13838Clathrin_H_linkClathrin-H-linkRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000547RepeatClathrin, heavy chain/VPS, 7-fold repeatInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR015348DomainClathrin, heavy chain, linker, core motifInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR016025Homologous_superfamilyClathrin heavy chain, N-terminalInterproscan
IPR016341FamilyClathrin, heavy chainInterproscan
IPR022365RepeatClathrin, heavy chain, propeller repeatInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10292CLATHRIN HEAVY CHAIN RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005198Molecular Functionstructural molecule activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005938Cellular Componentcell cortexInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0006898Biological Processreceptor-mediated endocytosisInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0030130Cellular Componentclathrin coat of trans-Golgi network vesicleInterproscan
GO:0030132Cellular Componentclathrin coat of coated pitInterproscan
GO:0032051Molecular Functionclathrin light chain bindingInterproscan
GO:0045334Cellular Componentclathrin-coated endocytic vesicleInterproscan
GO:0071439Cellular Componentclathrin complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04646CLTC; clathrin heavy chain-Endocytosis ko04144PMID: 28812709
Lysosome ko04142PMID: 28812709
Endocrine and other factor-regulated calcium reabsorption ko04961PMID: 28812709
Synaptic vesicle cycle ko04721PMID: 28812709
Huntington's disease ko05016PMID: 28812709
Bacterial invasion of epithelial cells ko05100PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_47521-1.5 global RNA-seq network
TOP