Gene detail

Detailed information of Bpl_scaf_46270-4.8 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_46270-4.8	SERINE/THREONINE PROTEIN KINASE	Bpl_scaf_46270	407914	421501	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_46270-4.8

ATGGCTGCCAAAACACTTGCAAATATATTCAAACGTGGTAAAGATGTTGTCCGTTTGGTGGTTACAAAATCTCAACCACAACAAACTGTAGAAGTTGGACAACCGGGGGCAGATTTATTCCATCTCCAACCGTCACGTGTTGTTGCCCCAATTAGGACTCTCTTATTTAGAAATAGGATATCCTACAAGACAATTGCAAGTCAGTTGAGAAGGAGAGCTGCATTTGAATTTGGAAGGAAAAACCCAATTCCTATTTTCGCTTTCGAGTTACTAGAAAGTAAGATCAGCACCAGTCCAATCATTCAACAGTTATCACTTCAGTCGTTTGAGTTTGGTAAAGTTATAGGTAAAGGTTGTAATGCTGTTGTATATGAAGCTAGACTGAAAGAAAGTGGAAGTGTGGAAAGGAGGACAATTCTAGATGATCATAATTCTTCAGACTTTGAAGAATTTATCAGTGCACAAGTAACAAATGAAGAAGAAGAAGAAGACATTGAAACAGAAGATGACAAATGGTACCCTCCAGAGGAGAGTTATCAAGGGGAGACAACAGAGAAACATGCAGATGATAATAATAAAGGGGAGATAACTGATACTGTTTCTATGAACAGTGTTAGTGATGTGGAGGATAGTGAGAGTTTTTGTGTGATCAACGACCATGAAGAGGAATCTACAAGCAGTTTTTCTTTGTTGGACAGCATTGAACGGGAGACAACCCACTGTGATAGTGATGATGAACATGGAGTCTTTCTTGATTTCACGTCTTTGTCGCTGGTAGAAAGTGATGCTGATTCCTATGATACAGAAACAACAAATGAAGAATCAGAAACTGGGGAAGAATGTGACAAATGGACTTTTGTTGGTGAAGAAATGGACGCTGAAGAGTCAAAAGAGAATGACACAGATGTAAAATATGATCTGGCAGTGAAAATGATGTTTAACTATGAAGTAGAATCTAAAGCAGACTCCATTTTGAAAGCTATGGAAAAAGAGACTGTGCCTGCCAGGATTCCAATCTACCAGATAGATGATTGTTGGTTTATAGGAAACAGAGTTAGACTTAAATCATTACCTCAACATGTTAATATCGTTGATATGTTTGGAGCTTTTGTTGATCCCTTTAATGTTCCTCAGATGTCTGTTGCCATGGAAACATATCCAGCAGCATTACCAAAAAGACTGTATTCTAGAGGACTTGGGCGTAACATGACAATGTATATAGTAATGAAAAAATACAATATGACACTGAGGCAGTATTTAGAAGAAAACAATCCTGATGTACAAACAAGATGTCTTCTGCTTACTCAACTTTTGGAGGGAGTAGTCCATTTACGGAATCATGGGATAGCTCACAGAGACATCAAAAGTGACAACTTGTTTCTTGATTTAACAGTACCTAATGCACCTCAACTTGTGATAGGAGACTTTGGATGTTGTTTAGCTGACACAGAATTTGGACAGCAACTACCTTACTTTACAGCTGATATTGACAGGGGAGGTAACTGCTCACTCATGGCACCAGAGATATCTACCGCCTCTCCTGGTAGAGATGTCTGGTTAGATTTTAGTAAAGCTGATCTGTGGGCTGTTGGAACCATCATATATGAACTATTTTCTATGGAGAATCCATTTTATGGAAACCAGTGTGGACAACATACACTGGACAGTAGAACATACAGAGAATCTGATTTGCCATCACTACCAGATGAAGTACCAGAAGCTGTAAGATTGCTTGCCAGGATGTGCTTGTCAAGAGATCCATTACAGAGACCATCTCCTGTTGATGCAGCCAACCTGATGCAAATATATCACTGGTTCCCTGCCTGGTTTAACACTAAGCCTATTGTATCTGTAGTAAAGGAGTCTCTACTGATACTGACAACTCGACTGATTTTACTGAGACAGCCATTAGACAAGTTGTGTCAGGCCGACCGGCTGATGTGGACGTTCTTACATAGAATCAACATAAATGATCTGATGAAGATGCTGTCTTAG

Transcript

Bpl_scaf_46270-4.8

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR008271	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR051511	Family	Mitochondrial Quality Control and Scaffold Kinases	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22972	SERINE/THREONINE PROTEIN KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000422	Biological Process	autophagy of mitochondrion	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0004674	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0042981	Biological Process	regulation of apoptotic process	Interproscan
GO:0090141	Biological Process	positive regulation of mitochondrial fission	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K05688	PINK1; PTEN induced putative kinase 1	EC:2.7.11.1	Mitophagy - animal	ko04137	PMID: 28812709
K05688	PINK1; PTEN induced putative kinase 1	EC:2.7.11.1	Parkinson's disease	ko05012	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_46270-4.8 global RNA-seq network