| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_45827-0.6 | UNCHARACTERIZED | Bpl_scaf_45827 | 29450 | 58426 | + |
| CDS | |||||
| Bpl_scaf_45827-0.6 | |||||
| Transcript |
| Bpl_scaf_45827-0.6 |
| Protein |
| Bpl_scaf_45827-0.6 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF12851 | Tet_JBP | Oxygenase domain of the 2OGFeDO superfamily | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR024779 | Domain | 2OGFeDO JBP1/TET, oxygenase domain | Interproscan |
| IPR040175 | Family | Methylcytosine dioxygenase TET1/2/3 | Interproscan |
| IPR046942 | Domain | Methylcytosine dioxygenase TET1-3, oxygenase domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23358 | UNCHARACTERIZED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006211 | Biological Process | obsolete 5-methylcytosine catabolic process | Interproscan |
| GO:0045944 | Biological Process | positive regulation of transcription by RNA polymerase II | Interproscan |
| GO:0070579 | Molecular Function | 5-methylcytosine dioxygenase activity | Interproscan |
| GO:0080111 | Biological Process | obsolete DNA demethylation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K13097 | TET1; methylcytosine dioxygenase | EC:1.14.11.80 | Transcription factors | ko03000 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_45827-0.6 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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