Gene detail

Detailed information of Bpl_scaf_45183-0.8 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_45183-0.8	ACYL-COA DESATURASE	Bpl_scaf_45183	71783	85577	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_45183-0.8

AGGCAAAACATCAGGTGATTATAAATATCGAAACACGTGTGGTATCACGTCACATTAATGTTATATTCTTTCACTAGTTTCATAGCGCGATATTAGAAGGAATATATACAAAACACAGAATGGCACCTAAGAATCCAATAGTAGATGTGGTCCCACCAATGGACGAAGGTGACGGCTTAGGTCTGGACCAGGTGTCTCCTGTTATAACAGAGGAAACACACGAACAAAAACGTCCACCAATGAGAATTGTTTGGAGAAATGTTGCAATACAGATTGGTCTCCATGTGTCAGCATTGTATGCTTTGACCCTGTTTCCATCAGCACATCCCTTTACCTGGTTATTTACAATTTACTACTATATTATATCAGCAATGGGGATCACTGCAGGAGCACATCGTCTTTGGGCACATAGAACATACAAAGCCAAGACCCCTCTACGCGTACTACTAGCAATGATGAATTCAGCCGCACTACAGAATGATATATTGGAGTGGTCCCGTGACCATAGAGTTCATCATAAATATTCCGAAACTGATGCAGACCCACACAATGCTAGGAGAGGTTTCTTCTTTGCCCACGTTGGATGGTTGCTTGTCAGAAAACATCCAGATGTTGTAATGAAAGGAAAGAAGCTTGATTTGTCAGATCTGTATGCTGATAAAGTAGTCATGCTACAACGAAGGTATTATCTTTATACTGCGTTAGTGATGTGTTTTATAGTACCTACAGTTGTTCCGTGGTATTTCTGGGGAGAATCTTTATGGAATTCTTATTTTATGTGTGGTATATTCAGATACGTTATAACTCTTAACGCAACATGGTTGGTAAACAGTGCTGCTCACATGTGGGGAAACCGTCCCTATGACAAAAGCATTAATCCTGCTGAAAATAGAGGTGTGGCAATCGGTTCTATCGGGGAAGGATTCCATAATTACCATCACACATTTCCACATGACTATGGCACCAGTGAATATGGTTGGCATTTAAATTTAACCACATGGTTTATAGACGTTATGGCGTTTCTTGGACAAGCTAGTGATAGAAGGAAAATTTCACAAAAGACAATTGATCAGAGAAAGCTAAGGACTGGAGAAGGTTCCGATTTAAAACATGAATAATTAAATATAATGATATGATTAAGAGGCATCGTCATTTTCTCCATGTTAGTCCATTGTCAGTACATGACTCCATCATCTTAATATGTAAACTTCCTCATAAAATGACTTCGATGTAGGCCTATTTGGGCCAAAGAAAAATAACATGTGTTTCTGCTTACATACTTTTAAAAAAGAGGGGAATGTAGGTAGGTTGTCAAACCCTCTTGTTTTTTTTATTACCTAGGCTATGTTATACATGACAAGAATCTTACAGTGCTTGTACAATAAATGGGAATAAAATCTAGGATATTACAGACCTGATTTTCGTCTGCTTTAAAGCGGAATTCCACTTTTTTTATTCCAGATTTTACCGTTGCGATTCCTTTTTTTTATAGTATATTCAATATTTCCGATTTTGTCGATTTCTGCTTTTTTGTTGTTCTCGTAAAAATCAGGTCTGACATTAGGAGTGGGCCGATGTGATTGTGCGGTAGTTTAATTTATAACTACCTATGCAATCAGTGCCTATCACCACCAAAGTTGCAAGTTCGAATCCTGCTCATGGTGAGGTGTACTTGATACAACATTATGTGATAAAGTTTTCAGTTTAAAAATTTTCAGTGGTTTTCTCCGGTTACTCTAGTTTCTTCCACTAATAAAACTGACAGTCATGATATAACAGAAATACTGTTGAAAATGGTGTTGAACTATAACCTCCTAAAAATTAGGATCCGTAGGATTAGCAGAAACAGGTATTTTTTTAACCTTGTCATGAAATGTTGAGGTCAAAAACTGTCGGTATTCAATTAACTATGAATCATCATGATCAAACATTGAAATTAGTTCTCGTCCAAAATTCCAAATACATTTTTTGTGTCATTTAATGTGCAAGTTAGCAGAACCAAAGATATATGTCTACAGCAAGTAATTATCAACATGACTTCAATCTCGAGAATCATTTTGACTTTTGTTAAAAAGACTGGATATCCAGATAGATCTACATGCCATTCAAGGCAGATTACAACAGAAAATCCTTAAATTTAAAATGAGCTAGGTCACTGTTACATATAGCAAGGCTTAAGGACAGAACAGTACTGCTAGACATGATGCTTGATTGTGGATACACCAACCAAGAGTTAGATCCACATTCCCCCTCTTCACGTGTAGAGGAATAGAGGTGGATTGTAACCCTTTGCTAGTGAAGATAGGATATTGTTTACAGTAAAATTGATATGTTTGATTAATAATCATAATAATAAATAAAATACTAAAGTGAAAGAAAGAATTTTGTGTTTCATGTTCAATTTAAATCCATATTGTAGAAGTTTTTTTTGTAAAAAAGTTAAAAATTGTATGATTGGTTGGTGTTTAATGCCAGATTTATCAGTATTTCATCTATATCATGACAGGAACGAATTTGAACAATGTATTAAATTTATCAGTTACAATACAAGTCCTTTTGAAATGGAACATTTTTTATGTACAAGTACAACTAAAAGAAAAATGAAAAAAAAAAGATAATAATTGATTCAATCATTGGATGTTTGAAGAAATAAGGCAGAACTATGTAAAATAAGAGATTCTGTTTTATATGTGAATAACAAAATTATTTTCTTAAATTAGGTCCTATCACAATCACTTCTTATTTAATTTTGAAATGTGATTAAAAAAAAAACATTATCAATTAACTTTTGTAACAGTACTTTTTAACTGTAATAATCTCTTGTCATTTTTCACAATGTGTTACAATGTATATGATATAAATAACTGCCCTTGACATTTGTTTGATCTCTTTGTATTATGTAAAATATGCTGAATTTGTTGATTTAATTTGCCTTAAATAAAATGATTAAATATTTACAGCATTTTATCTCATACTAATAATATTGCCCCATGGTCACCCCAAATTGTGTAAATATATAAAACCTTATTAAACATAAATTTCAGTATTAATTGTACCTATATCAAGTATACATATCAAACAGCATGTGGGATTTGTCCTTGGTTTAGGGTCATTCAACTTTCACCAAACCCTGACCCTAGCTTGAGTCTAACAAATATTGGCATTGAATGGTAATTGACCTGTGACTATTCTAGTACAGTTGTTCTTTATTCAAGGCAAATAAGATTGTGTATTCAAGGTCATTTAATGATGAATTTGGGATATGACTTCATTATTAAAAGATTACTTGATTATATCAGAGCTCTAGTATACTGGATTGTGTCTTTTCTATTACAGCAATACAGGGATGATTTAGTTTAACTGATGTTAGCTATTTGTCTGTGAAAAGGAAATTCCAAAAATAGCAGGACAGTTCAAAACATATTTTTGAAAGGGGGTGTAGATGGTTTCAGATATTTTATTGATTTTCATCCCTGACATTAGGAGAAATGTTTACATCTTGTAGATTTATTTATTGAACACAATTTTACTCCCAAAAGGGGTTAAGGCATACACAAAGTGAAATATTAATCAATGAAAAATTTATTTCAGTAGAAAAAATAAACAAAC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00487	FA_desaturase	Fatty acid desaturase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001522	Conserved_site	Fatty acid desaturase type 1, conserved site	Interproscan
IPR005804	Domain	Fatty acid desaturase domain	Interproscan
IPR015876	Family	Acyl-CoA desaturase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11351	ACYL-COA DESATURASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004768	Molecular Function	stearoyl-CoA 9-desaturase activity	Interproscan
GO:0005506	Molecular Function	iron ion binding	Interproscan
GO:0005789	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0006629	Biological Process	lipid metabolic process	Interproscan
GO:0006636	Biological Process	unsaturated fatty acid biosynthetic process	Interproscan
GO:0016717	Molecular Function	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00507	SCD, desC; stearoyl-CoA desaturase (Delta-9 desaturase)	EC:1.14.19.1	Fatty acid metabolism	ko01212	PMID: 28812709
			Biosynthesis of unsaturated fatty acids	ko01040	PMID: 28812709
			AMPK signaling pathway	ko04152	PMID: 28812709
			PPAR signaling pathway	ko03320	PMID: 28812709
			Longevity regulating pathway - worm	ko04212	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_45183-0.8 global RNA-seq network