| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_42183-0.42 | NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING | Bpl_scaf_42183 | 29264 | 40382 | - |
| CDS | |||||
| Bpl_scaf_42183-0.42 | |||||
| Transcript |
| Bpl_scaf_42183-0.42 |
| Protein |
| Bpl_scaf_42183-0.42 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01189 | Methyltr_RsmB-F | 16S rRNA methyltransferase RsmB/F | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR023267 | Family | RNA (C5-cytosine) methyltransferase | Interproscan |
| IPR029063 | Homologous_superfamily | S-adenosyl-L-methionine-dependent methyltransferase superfamily | Interproscan |
| IPR049560 | Domain | SAM-dependent methyltransferase RsmB-F/NOP2-type, catalytic core | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22808 | NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0001510 | Biological Process | RNA methylation | Interproscan |
| GO:0005762 | Cellular Component | mitochondrial large ribosomal subunit | Interproscan |
| GO:0008168 | Molecular Function | methyltransferase activity | Interproscan |
| GO:0008173 | Molecular Function | RNA methyltransferase activity | Interproscan |
| GO:0031167 | Biological Process | rRNA methylation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for Bpl_scaf_42183-0.42 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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