| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_41492-0.52 | ACTIN | Bpl_scaf_41492 | 55907 | 60416 | + |
| CDS | |||||
| Bpl_scaf_41492-0.52 | |||||
| Transcript |
| Bpl_scaf_41492-0.52 |
| Protein |
| Bpl_scaf_41492-0.52 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00022 | Actin | Actin | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR004000 | Family | Actin family | Interproscan |
| IPR004001 | Conserved_site | Actin, conserved site | Interproscan |
| IPR020902 | Conserved_site | Actin/actin-like conserved site | Interproscan |
| IPR043129 | Homologous_superfamily | ATPase, nucleotide binding domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11937 | ACTIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| - | - | - | - |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K05692 | ACTB_G1; actin beta/gamma 1 | - | Rap1 signaling pathway | ko04015 | PMID: 28812709 |
| Hippo signaling pathway | ko04390 | PMID: 28812709 | |||
| Hippo signaling pathway -fly | ko04391 | PMID: 28812709 | |||
| Phagosome | ko04145 | PMID: 28812709 | |||
| Apoptosis | ko04210 | PMID: 28812709 | |||
| Focal adhesion | ko04510 | PMID: 28812709 | |||
| Adherens junction | ko04520 | PMID: 28812709 | |||
| Tight junction | ko04530 | PMID: 28812709 | |||
| Regulation of actin cytoskeleton | ko04810 | PMID: 28812709 | |||
| Platelet activation | ko04611 | PMID: 28812709 | |||
| Leukocyte transendothelial migration | ko04670 | PMID: 28812709 | |||
| Oxytocin signaling pathway | ko04921 | PMID: 28812709 | |||
| Thyroid hormone signaling pathway | ko04919 | PMID: 28812709 | |||
| Phototransduction - fly | ko04745 | PMID: 28812709 | |||
| Proteoglycans in cancer | ko05205 | PMID: 28812709 | |||
| Fluid shear stress and atherosclerosis | ko05418 | PMID: 28812709 | |||
| Hypertrophic cardiomyopathy (HCM) | ko05410 | PMID: 28812709 | |||
| Arrhythmogenic right ventricular cardiomyopathy (ARVC) | ko05412 | PMID: 28812709 | |||
| Dilated cardiomyopathy (DCM) | ko05414 | PMID: 28812709 | |||
| Viral myocarditis | ko05416 | PMID: 28812709 | |||
| Vibrio cholerae infection | ko05110 | PMID: 28812709 | |||
| Pathogenic Escherichia coli infection | ko05130 | PMID: 28812709 | |||
| Salmonella infection | ko05132 | PMID: 28812709 | |||
| Shigellosis | ko05131 | PMID: 28812709 | |||
| Bacterial invasion of epithelial cells | ko05100 | PMID: 28812709 | |||
| Influenza A | ko05164 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_41492-0.52 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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