Detailed information of Bpl_scaf_41465-0.5 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_41465-0.5PDZ AND LIM DOMAIN PROTEIN ZASPBpl_scaf_4146559721107983+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00412LIMLIM domainDomainInterproscan
PF00595PDZPDZ domainDomainInterproscan
PF15936DUF4749Domain of unknown function (DUF4749)FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001478DomainPDZ domainInterproscan
IPR001781DomainZinc finger, LIM-typeInterproscan
IPR031847DomainPDZ and LIM domain protein 1-4/Zasp-like, middle domainInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR050604FamilyPDZ and LIM domain-containingInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24214PDZ AND LIM DOMAIN PROTEIN ZASPInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0001725Cellular Componentstress fiberInterproscan
GO:0003779Molecular Functionactin bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005912Cellular Componentadherens junctionInterproscan
GO:0030018Cellular ComponentZ discInterproscan
GO:0030036Biological Processactin cytoskeleton organizationInterproscan
GO:0031941Cellular Componentfilamentous actinInterproscan
GO:0051371Molecular Functionmuscle alpha-actinin bindingInterproscan
GO:0061061Biological Processmuscle structure developmentInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19867PDLIM5_6_7; PDZ and LIM domain protein 5/6/7-Cytoskeleton in muscle cellsko04820PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_41465-0.5 global RNA-seq network
TOP