| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_40762-5.24 | TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN54 | Bpl_scaf_40762 | 423347 | 437957 | + |
| CDS | |||||
| Bpl_scaf_40762-5.24 | |||||
| Transcript |
| Bpl_scaf_40762-5.24 |
| Protein |
| Bpl_scaf_40762-5.24 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF12928 | tRNA_int_end_N2 | tRNA-splicing endonuclease subunit sen54 N-term | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR024336 | Domain | tRNA-splicing endonuclease, subunit Sen54, N-terminal | Interproscan |
| IPR024337 | Family | tRNA-splicing endonuclease, subunit Sen54 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR21027 | TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN54 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000214 | Cellular Component | tRNA-intron endonuclease complex | Interproscan |
| GO:0000379 | Biological Process | tRNA-type intron splice site recognition and cleavage | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K15326 | TSEN54; tRNA-splicing endonuclease subunit Sen54 | - | Transfer RNA biogenesis | ko03016 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_40762-5.24 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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