Gene detail

Detailed information of Bpl_scaf_40595-7.8 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_40595-7.8	LETHAL 2 GIANT LARVAE PROTEIN	Bpl_scaf_40595	693581	762104	+

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_40595-7.8

ATGTTCAAGTTTCTAAAGAAGCATCCCCCTAAAGATAGTGAGGAGAGGGAAAAATTAAAAAGGGAATTGTTTGGGTTCAAAAGGTGTACAGAGCATGGATTTATCAACAAGCCATCATGTATGGATTATGACCCAAAACTTCGATTGTTAGCCATTGGAAACAAGCAAGGTTATATCAAAATAGTAGGACAACCTGGTGTGGAATTTTGTGGTGAGTTAAAGAGTGGAGCGTCTGTCAACCAATTGTTTTTCCTTGCTGAAGAGGCTCGCCTCATATCGCTGTGTGGAGACAACACTATCACGTTATGGGAGATAAATGATAAAGGAGAGAATACCATACTAGAAGATGTGAAAGAATTTAAATTCAGCGCTGAAGAAAGTAAATTTAAGAACATATCAGTATGTTGTTTAACCAAAAACAAAGACCATCTGCTGATTGGAACAGAAGTAGGAAATATTTTTATGTTAGATTTAAAAACATTCCAATTACTGGACCAAATTATATACCAGGATGTTGTCATGCAAAATGTACCAGATGATTTCAAAGTTAACCCTGGTGCAGTTGAGGCCATCGCTGTTCACCCTACAAATCCAGATAAGGTACTGATTGGTTACAACAGAGGACTGGTTGTACTGTGGGATAACAAGAACAGTAATACAGATCAAACATACAATGCTACTCAGCAACTGGAATCTTTGTGCTGGCATAGAAACGGTGAAGAATTTCTGAGTGCTCATATTGATGGCAGTTATATTGTATGGAGTGTAGCAGATTCTAGTACACCTAAGGAACCAGCTCTTACACCTTATGGTCCATTTCCTTGTAAGGCAATTAGTAAAGTGGAATGGAAAACATCAAAATCAGAACCGTTTATCATATTTTCTGGAGGAATGCCTCGGGCCAGCTACGGAGACAAACATACCATCAGTGTTATGGAGGGATCAAACCATGTTGTCTTTGACTTCACATCTAAAGTTATAGATTTTATAACTTTAAGTAGAGCAGATTCCAGTGAAGAAGATCACAGTGAACATGATGAACCACACTGTTTAATAGTTTTACTAGAAGAAGAATTGATTGTGATAGATTTAGATTCACAGAACTGGCCATCGTTCCAGAACCCATATCTAAACAGTCTTCACTCATCACCCATCACTTGTTCAAATCATGTAGCTAATGTACCTGATCAGTTATGGCAAAAAATCGCTGATGTTGGAGAATCTCAAGCAAAATCACATTCAAAGAGGGAATGGCCAATAAATGGAGGCAAACTAAAAGGAGCAGAAGGAATATCTAAAGATTTGTTACTGACAGGACATGAAGATGGTACCATAAAATTCTGGGATGCTTCAGGTTTAGCCATGAGATTACTGTACTCTCTGTCTACTGCTACCATGTTTAATGTGGACTTCCATCCTGGAGAACAGAACTCTCCTGAAGTGGAGGAAGAATGGCCACCATTTAGAAAAGTAGGAATATATGATCCATTCAGTGATGATCCAAGACTAGGCATACAGAAAATAACAATGTGTCCACTCAGTGAAACCTGTGTTATTGCTGGTACTGCTGGTCAAGTTGTGGTATTACAAATGGAACGTGAGGAACGAGAGTATGAAGTTTCTTCTAATACCATGAACATTGTTAGTGATCGTGATAATTTTGTGTGGAAAGGACACGAGGCACTAAAGTCCAGGGAAGGAGAAGTGAAATATGCCGCAGGATTCCAGCCTACAGTTATGATGCAACTGTATCCACCAGCAGCATGTACTGCTCTTGGATTCCACTCTGAATGGCAACTAATGGCAGCTGGTACAGCTCACGGTTTTGCCCTGTTTGATTATGCTCAAAAGAAACCAATAGCAACCAGATGCACTTTAAATCCAGGAGATATGACTGGGACATCAGATACACCAATGTCAAGACGTAAATCATTTAAGAAATCCTTAAGGGAATCCTTCCGTAGACTTAGACGGAGAAGATCAGAGAGGAGACAAGATAAAGCTAAACCAGAACAAAAAACTGAAGAAAAAAAACCAGAAGAAGAAGGAAGCTCATCTCCATCTAAAAGTAGAGCATCCCCAGGGGCATCACCAGAACCACGCCCAATAGAAAGACAAATTGAGGCTAGAAATCCAGATGAAACTGTAGGATCTATGGTGCGATGCCTTTATTTTGCAAATACCTTTGTTTCAAATAGTACAGAGAGTGCACCATCATTATGGGTGGGAACAAATGGCGGCCATGTTTATATTTATACAATGACAGTTCCTACAGAAAAGAGGAATGAATCGGACGTTATAGCAGTTATCGCTAAAGAGATAAAATTAAGACATAAAGCACCTGTAATACATATTGCTGTAGTTGATGGAAAATCTCGAGTGTTGCCGGAACCGCTGGAAGTACAAAATGAGAGAGCTAAGGCAGCAGATTACTCCGGGCCTCATCATACTGTAGTCATTTGTTCTGAAGAACAACTTAAAGTTTTTACATTGCCACAATTGAAAGCCAAGTGCAAATATAAAGTAACAGCTTTAGATGGGTCTAGGATTAGAAAAGTAGCATTTATTAATTTTAGAAGTAAAAGTGATGAGAACTATAATGAATTTGACATTGCCTGTTTAACCAATCTTGGAGATTTAAGTGTTTATTCTGTCACCTCACTGAGGCAGCAACTGATAGCATCAGCTTTGAAGAGAGAAGACATAACTGGCATTTCATCATTCATCTTCACAAGACATGGACAGGGATTTTATTTACTGTCATCATCAGAATATGCTAGGATAACGCTGTCGTCACGGAATGTGACAGAGCCTAACTGTAGTGTTGAACTTAAAGAAGGAATGAGACCAGAACCTGTTCCTGAACCTGAACCAGTAGTCATTGTTGAACCTCCTAAAGAAGAACAAGAAGAGAAAAAAGAAGAAGAAGCTCGTCTAACCCCAGAAGATCGGTATAATAGTGGAGACATTGTTGAAGCTTTGAATGAATCACAGTTGAACGAATCACAAGCCAACTCTACCGTTGAAGGGGAAGTAACACAAGACAGCATACGAGTACTACAAGATTCAGTAGTTGAATCAACAACAGTAATAACTTCAGCAGAGACGACCACAGTTACTACAACAGAGGAGACAGTTACACATACAGTCACATCAGGAGGGGGCGATGGACCAGGAACAGAATCTTCCATCAATGTTGATGATGATACGAAATCTACACAGCCCAGTATTACTACACAGATGACAACTGAGGTTACTGAAGTTCAAAATAAGATAATAGAATTGAAGATTACAGAAGATGATGCTGCACTTGTCAAGAAAAACCTCCAAGAAACAGAAGCAGTGATTAATGAGGCTCCTGTTGTCAGCTAG

Transcript

Bpl_scaf_40595-7.8

GGTCAATCGATTGAGGTTACGCCAAAGCTTGGCGCGGGTTTGAATTCCGGTGAGTTTTGAAGTCGAGAAATAAATAAGCCTATAGATTGTAAAGACATAGGAACTGCTCGGTCACAGGTGGTTCGATTTACTGATTCAAGATGTTCAAGTTTCTAAAGAAGCATCCCCCTAAAGATAGTGAGGAGAGGGAAAAATTAAAAAGGGAATTGTTTGGGTTCAAAAGGTGTACAGAGCATGGATTTATCAACAAGCCATCATGTATGGATTATGACCCAAAACTTCGATTGTTAGCCATTGGAAACAAGCAAGGTTATATCAAAATAGTAGGACAACCTGGTGTGGAATTTTGTGGTGAGTTAAAGAGTGGAGCGTCTGTCAACCAATTGTTTTTCCTTGCTGAAGAGGCTCGCCTCATATCGCTGTGTGGAGACAACACTATCACGTTATGGGAGATAAATGATAAAGGAGAGAATACCATACTAGAAGATGTGAAAGAATTTAAATTCAGCGCTGAAGAAAGTAAATTTAAGAACATATCAGTATGTTGTTTAACCAAAAACAAAGACCATCTGCTGATTGGAACAGAAGTAGGAAATATTTTTATGTTAGATTTAAAAACATTCCAATTACTGGACCAAATTATATACCAGGATGTTGTCATGCAAAATGTACCAGATGATTTCAAAGTTAACCCTGGTGCAGTTGAGGCCATCGCTGTTCACCCTACAAATCCAGATAAGGTACTGATTGGTTACAACAGAGGACTGGTTGTACTGTGGGATAACAAGAACAGTAATACAGATCAAACATACAATGCTACTCAGCAACTGGAATCTTTGTGCTGGCATAGAAACGGTGAAGAATTTCTGAGTGCTCATATTGATGGCAGTTATATTGTATGGAGTGTAGCAGATTCTAGTACACCTAAGGAACCAGCTCTTACACCTTATGGTCCATTTCCTTGTAAGGCAATTAGTAAAGTGGAATGGAAAACATCAAAATCAGAACCGTTTATCATATTTTCTGGAGGAATGCCTCGGGCCAGCTACGGAGACAAACATACCATCAGTGTTATGGAGGGATCAAACCATGTTGTCTTTGACTTCACATCTAAAGTTATAGATTTTATAACTTTAAGTAGAGCAGATTCCAGTGAAGAAGATCACAGTGAACATGATGAACCACACTGTTTAATAGTTTTACTAGAAGAAGAATTGATTGTGATAGATTTAGATTCACAGAACTGGCCATCGTTCCAGAACCCATATCTAAACAGTCTTCACTCATCACCCATCACTTGTTCAAATCATGTAGCTAATGTACCTGATCAGTTATGGCAAAAAATCGCTGATGTTGGAGAATCTCAAGCAAAATCACATTCAAAGAGGGAATGGCCAATAAATGGAGGCAAACTAAAAGGAGCAGAAGGAATATCTAAAGATTTGTTACTGACAGGACATGAAGATGGTACCATAAAATTCTGGGATGCTTCAGGTTTAGCCATGAGATTACTGTACTCTCTGTCTACTGCTACCATGTTTAATGTGGACTTCCATCCTGGAGAACAGAACTCTCCTGAAGTGGAGGAAGAATGGCCACCATTTAGAAAAGTAGGAATATATGATCCATTCAGTGATGATCCAAGACTAGGCATACAGAAAATAACAATGTGTCCACTCAGTGAAACCTGTGTTATTGCTGGTACTGCTGGTCAAGTTGTGGTATTACAAATGGAACGTGAGGAACGAGAGTATGAAGTTTCTTCTAATACCATGAACATTGTTAGTGATCGTGATAATTTTGTGTGGAAAGGACACGAGGCACTAAAGTCCAGGGAAGGAGAAGTGAAATATGCCGCAGGATTCCAGCCTACAGTTATGATGCAACTGTATCCACCAGCAGCATGTACTGCTCTTGGATTCCACTCTGAATGGCAACTAATGGCAGCTGGTACAGCTCACGGTTTTGCCCTGTTTGATTATGCTCAAAAGAAACCAATAGCAACCAGATGCACTTTAAATCCAGGAGATATGACTGGGACATCAGATACACCAATGTCAAGACGTAAATCATTTAAGAAATCCTTAAGGGAATCCTTCCGTAGACTTAGACGGAGAAGATCAGAGAGGAGACAAGATAAAGCTAAACCAGAACAAAAAACTGAAGAAAAAAAACCAGAAGAAGAAGGAAGCTCATCTCCATCTAAAAGTAGAGCATCCCCAGGGGCATCACCAGAACCACGCCCAATAGAAAGACAAATTGAGGCTAGAAATCCAGATGAAACTGTAGGATCTATGGTGCGATGCCTTTATTTTGCAAATACCTTTGTTTCAAATAGTACAGAGAGTGCACCATCATTATGGGTGGGAACAAATGGCGGCCATGTTTATATTTATACAATGACAGTTCCTACAGAAAAGAGGAATGAATCGGACGTTATAGCAGTTATCGCTAAAGAGATAAAATTAAGACATAAAGCACCTGTAATACATATTGCTGTAGTTGATGGAAAATCTCGAGTGTTGCCGGAACCGCTGGAAGTACAAAATGAGAGAGCTAAGGCAGCAGATTACTCCGGGCCTCATCATACTGTAGTCATTTGTTCTGAAGAACAACTTAAAGTTTTTACATTGCCACAATTGAAAGCCAAGTGCAAATATAAAGTAACAGCTTTAGATGGGTCTAGGATTAGAAAAGTAGCATTTATTAATTTTAGAAGTAAAAGTGATGAGAACTATAATGAATTTGACATTGCCTGTTTAACCAATCTTGGAGATTTAAGTGTTTATTCTGTCACCTCACTGAGGCAGCAACTGATAGCATCAGCTTTGAAGAGAGAAGACATAACTGGCATTTCATCATTCATCTTCACAAGACATGGACAGGGATTTTATTTACTGTCATCATCAGAATATGCTAGGATAACGCTGTCGTCACGGAATGTGACAGAGCCTAACTGTAGTGTTGAACTTAAAGAAGGAATGAGACCAGAACCTGTTCCTGAACCTGAACCAGTAGTCATTGTTGAACCTCCTAAAGAAGAACAAGAAGAGAAAAAAGAAGAAGAAGCTCGTCTAACCCCAGAAGATCGGTATAATAGTGGAGACATTGTTGAAGCTTTGAATGAATCACAGTTGAACGAATCACAAGCCAACTCTACCGTTGAAGGGGAAGTAACACAAGACAGCATACGAGTACTACAAGATTCAGTAGTTGAATCAACAACAGTAATAACTTCAGCAGAGACGACCACAGTTACTACAACAGAGGAGACAGTTACACATACAGTCACATCAGGAGGGGGCGATGGACCAGGAACAGAATCTTCCATCAATGTTGATGATGATACGAAATCTACACAGCCCAGTATTACTACACAGATGACAACTGAGGTTACTGAAGTTCAAAATAAGATAATAGAATTGAAGATTACAGAAGATGATGCTGCACTTGTCAAGAAAAACCTCCAAGAAACAGAAGCAGTGATTAATGAGGCTCCTGTTGTCAGCTAGACCTTTACATAGGATAGCCTTCAGTGGCATATGTTTTTATTGACGATGATTGAAGGACTAACTGAGATGTAGTTTTATGTTGTTTGTGCTTGGCTTGTTTTAAGTTATTTTTGGATGAAGCAGTTAATTAAAATCATTCCAAGTTGTATTTTAAAAATTTTTATACTGAAAGCTAATGTTTATTATATTGTACAAATTAAGTTTAGATTTCTCTCGATAGAAAAGAAAAGAGTGAATTTTGATGTTCTTGTAGATATAGAAAATATGTGTAGATCGGATTTAAAAAAAAAAAAAAAAAAAAGAAGATATTTCGGTCCTATATTTCTTTTTGGTGAATTTGCATAAAATTAGAAGAAAAATAAATGTTTGTTTTGAAGAAAATGTCTTCCCTTCACACAAGATATTGCATAATATTTATAGATTTTTGTAAAGAATGTTGAAAGTTAATAATATAATTGATGCAATGATTTTTAATGTTAGATTTTTACAATAATAGGTAGGCTATTTTTTTGGGGTTGGTATTACCTGTGGTTGTGGTATTAAGAGCCGTTTATTGTATATTTTATTACCCTTGTGCAATATAGTGTAGAAATATTTTCAAAATATTTTTATTCAGTATAAGGCTTCTTTTAAAAAAAAAATCAATTTTTTTTTTTTTTCGAAAACAAAAATTTAGAAAGTAAACATAAGCAAAGACAAATAAATATATACCTATATAAGAAGTCTACAGTATCTATATATATGCTATTGTTCATGATAAATGCAGTATTGGTATGAAAACGTAACGTGTAACATAATAGACTTATTATAACATAAATATAAAACGTGCTATTAAAAATTCTACTACGCATGATAAAACTAATAACAAAATAAGGTTGTAACTTTTAATATTATAATGTAATAGTCAAATTTGTTGTGATTTTCCAAAAAATACTACTTTATTTAATAACTTAAAATTTTAGTAAAATGCAGAATATTGTTATTATTCTGTATGATTGAAGATAAAAATTGGAACCCTCGTCCATATTAGACAGAAAGAAAGAGAGAGACCCAAAAAAAAAATGTATTGGGTGAACAATTTGTGTTAATCAGTTTGTAAATTGATCAAATAGGTTGTGTTTCAAATGAAATTGTGTAAGATATTTTAGTTTTTGTATAAAACAATTGTTTTTACGAGACCAAATTGATATGTGATTAATAAATTTTATATTTTTAAGGATTTGCTTCTATGCATTTTGATGAGGCTTTTCGTCAATGTTTTGTTAAAAATTACATGTTTTATGTGCCTAACTATTCATGGTTGGGGTTTTTTCTGTCCAACCTGTGCAAAAAAGAGCTATTTTTGAAATTATATGCATATTTCTTTAAAAAAAAAGAATTGAGAGCAATATTGTAAGATTTTTTTTGTGATAGGACTTACTCCAGTATGTTGTCTATGTATATGATCATATTTTAACCAAAGAAAGCTATTATTGTTTTTGAAGATCCATCCATTAGTTTTCATTAGCTTTTCTTATGATGTTTCTTTATGTAAATGCTATTTCTTGT

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08366	LLGL	LLGL2	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000664	Family	Lethal(2) giant larvae protein	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR013577	Domain	Lethal giant larvae homologue 2	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10241	LETHAL 2 GIANT LARVAE PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005096	Molecular Function	GTPase activator activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0008593	Biological Process	regulation of Notch signaling pathway	Interproscan
GO:0019905	Molecular Function	syntaxin binding	Interproscan
GO:0030864	Cellular Component	cortical actin cytoskeleton	Interproscan
GO:0030866	Biological Process	cortical actin cytoskeleton organization	Interproscan
GO:0032878	Biological Process	regulation of establishment or maintenance of cell polarity	Interproscan
GO:0045159	Molecular Function	myosin II binding	Interproscan
GO:0050708	Biological Process	regulation of protein secretion	Interproscan
GO:0051294	Biological Process	establishment of spindle orientation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06094	LLGL; lethal(2) giant larvae protein	-	Hippo signaling pathway	ko04390	PMID: 28812709
			Hippo signaling pathway -fly	ko04391	PMID: 28812709
			Tight junction	ko04530	PMID: 28812709
			Human papillomavirus infection	ko05165	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_40595-7.8 global RNA-seq network