Gene ID | Annotation | Scaffold | Start | End | Strand |
---|---|---|---|---|---|
Bpl_scaf_39615-1.22 | NIBRIN-RELATED | Bpl_scaf_39615 | 133771 | 179358 | + |
CDS | |||||
Bpl_scaf_39615-1.22 | |||||
Transcript |
Bpl_scaf_39615-1.22 |
Protein |
Bpl_scaf_39615-1.22 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF08599 | Nbs1_C | DNA damage repair protein Nbs1 | Family | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR013908 | Domain | Nibrin, C-terminal | Interproscan |
IPR040227 | Family | Nibrin-related | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR12162 | NIBRIN-RELATED | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0000724 | Biological Process | double-strand break repair via homologous recombination | Interproscan |
GO:0003684 | Molecular Function | damaged DNA binding | Interproscan |
GO:0006302 | Biological Process | double-strand break repair | Interproscan |
GO:0007095 | Biological Process | mitotic G2 DNA damage checkpoint signaling | Interproscan |
GO:0030870 | Cellular Component | Mre11 complex | Interproscan |
GO:0032508 | Biological Process | DNA duplex unwinding | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
K10867 | NBN, NBS1; nibrin | - | Homologous recombination | ko03440 | PMID: 28812709 |
Cellular senescence | ko04218 | PMID: 28812709 |
1. Expression trend for Bpl_scaf_39615-1.22 global RNA-seq network |