Gene detail

Detailed information of Bpl_scaf_39274-0.4 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_39274-0.4	1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED	Bpl_scaf_39274	1777	49752	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_39274-0.4

ATATTGAGATACTACGACATTGTATCTTACATTACCATGGTATATTGAGATACTACGACATTGTATCTTATGTTACCATGGTATATTGAGATACTACGACATTGTATCTTATGTTACCATGGTATATTGAGATACTACGACATTGTATTTTACGCTACCATGGTATATTGAGACACTACGACACTGTATTTTATGTTACCATGGTAAACTGAGATACTACGACATTGTATCTTACGTTACCATGGTAAATTGAGATACAACGACATTGTATTGTACATTACCATGGTTATATTGAGATCATTGTTTTTACAGAGGATTAGAGATGTACAGTGTTATATTAGAACAGTTAGTGACTATTAACTCATCTAGTGATGAACTGTCTAAGATGGTAGTAGATCTTACCAACATATTAGAGGGAGAAAAATATAGATTAAAGGAACTGATTCATCAAGGTAGACTAAAGGTGATAGAAAAAGAAACAGAGAAATCAGAAAGCATGACTGAGTATTATCTATTGTATGATGAATCATTGAAGATGATGAGGATATTAGCTGATGCTGAAATCAACTGGAGGTCAAAGATGCAGGAGTTGTATTCACAACACAAAAAAAATAAACCAGTATCACAACCCAAAAGAGAAAAAGACATTACGGGAACTGCTTCATCAGTTAGAGAGCTAGTAACACAAACGAGAAACGACAGGGACAATACAATATCAGTTCCCTACACTGGGGAATCAGTATTACAAGTTAATAAAGACACTGAATCAACTCCTCCTACTGTAGGAGGACCAGAACATGAGCTTACAGCCTCTGTATCCTCTCATGTATCATCAGTAGAAGATGTAGAAATATCTAGGACTTGGTCTGGTGTTGTTGTGGATAAATCAGAATTACCACCTTCAGACTCAATTCCTGTAGACATAGACCAGTCCTATTTCCTTGCAGATAGCGGTATCTACAGTATGACACCAGGACTAGTTGCAGGTCTTCATTTTCAAGAAATGAAAACAAATGATGTTGATAAAACCATGGCAACAGGAGTAAAATCTAAACCAATGATATCTGATGTGTCTATTGAATCACATATAGACCCTAGTAACAAATCAAAACAAATAGACAATACAACGTCTGAATTGAAAGGTCAATCTGATGTACAACAAGAGAAAATTGATAGTGAGAAGAAATTTAAACTACGTAAAGAAGGAGGAAGAAAGACAGATGATTACACAGACGGTCAACAGGTAGAGAGAATCAGTGATATTATGAAGAAAACAATAACAAACCTTCTGTCTGGAACAGGATTATCTCTCTGGCCATTTCCTTTTGACTGCAGAGAACATCATTTACTGCCAACCTGTTATAAAGTTCCTGTAGTAGTTTATGACCAGGAGCCAAGTTCAATAATAGCTTATGCTTTGAGCTCGTATGATTATCACCACAAGTTACAAGAGATTCAGTCTGTCTTCAGTACATCACAGAAATTTTGTAGTAGTAGCAACAAAGAATTAAAGGTTGATGATGATACAGGAAGTAAAGAAACAATGCCATCTGGTGGAGAATTATCCAAAAAGAATGCAGGCAGTATATTATCATTTGTGAAAAACAAAGAATCCAGTCCAAAGCTGACTAAACTTGATGCTGTACGATATAACCCTAAGATAGATACAGGAAATGCTGAATCAGATGATGAGAATAGTTTCTCCTTGTTATCAAGTAGTCTAGCTGAATCTGACAAATACAAGTCAGGGAAACAGACACAGGGACCGCATATAGAACTACAGTACTCTGATCATATGGCCAAATTCTATTGTAAAATATATTTTGCTGAACAGTTCCGAAAATTACGTAAATTGATATATCCTGCTGGAGAAGAAATGTATATAAGATCCTTAAGTCGTTGTAAAATGTGGGAAGCCAAAGGAGGGAAATCTGGCTCTAAATTCTGTAAAACTGATGATCAACGGTTTATATTAAAACAGATGTCTGGGGCAGAGATTGATATTTTTGAGAAGTTTGGACCAGAGTATTTTACTTATATTAGTAAATCATATCTAGAACAGAAGCCTACTGCCTTAGGTAAGATAGTGGGGGTCTACAGGATAGGGTTCAGAAACACACATACTAATGCTGGCATTAGACAAGATTTACTGGTTATGGAGAACTTGTTTTATGGAAGGAAAATTTCTCAGGTAAGGAACTTAAAGAAATTGAAAGGAATA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01504	PIP5K	Phosphatidylinositol-4-phosphate 5-Kinase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002498	Domain	Phosphatidylinositol-4-phosphate 4/5-kinase, core	Interproscan
IPR027484	Homologous_superfamily	Phosphatidylinositol-4-phosphate 5-kinase, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45748	1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000285	Molecular Function	1-phosphatidylinositol-3-phosphate 5-kinase activity	Interproscan
GO:0010008	Cellular Component	endosome membrane	Interproscan
GO:0046488	Biological Process	phosphatidylinositol metabolic process	Interproscan
GO:0046854	Biological Process	phosphatidylinositol phosphate biosynthetic process	Interproscan
GO:0052742	Molecular Function	phosphatidylinositol kinase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00921	PIKFYVE, FAB1; 1-phosphatidylinositol-3-phosphate 5-kinase	EC:2.7.1.150	Inositol phosphate metabolism	ko00562	PMID: 28812709
			Phosphatidylinositol signaling system	ko04070	PMID: 28812709
			Phagosome	ko04145	PMID: 28812709
			Regulation of actin cytoskeleton	ko04810	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_39274-0.4 global RNA-seq network