Gene detail

Detailed information of Bpl_scaf_38784-7.12 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_38784-7.12	DEOXYRIBODIPYRIMIDINE PHOTOLYASE	Bpl_scaf_38784	661934	676514	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_38784-7.12

TTCAGACAATTGGGCTTTCTTGTATGCACAGAAGTTGGCACTGAAAATGGAAGTTCCTTTATATGTTTGTTTTTGTCTGGTGCCAAAGTTTTTAGAAGCAACAATTAGACATTACACATTTATGTTGGAAGGTTTAAGGGAAGTTGAACAAGAATGTAATAACTTGAATATATCTTTCCATTTGTTACTTGGGTATGCAAAAGACGTTTTACCACAGTTCCTGAAAGACAACAATATAGGAGGATTAGTTACAGATTTCTCTCCCTTACGTACACCAACAGCTTGGGTAAATGATGTGACAGCCGCTTTACCTAAAGATGTTCCAATTTGTCAGGTTGATGCACACAACATAGTACCGTGTTGGGAAGCCTCTCCAAAGCAAGAATATGGTGCTAGATTTATGAGAAATAAAATTCATAACCAGCTGTCGGGATATCTAACAGAATTTCCTCCTGTCTTTGTCCATCCATATACTGCTGAAACTAAATCAAAGGCTGTTGATTGGGCTACAATAGAGACCAACTTAGTTGTTGACAGGACTGTGGGACCTGTTGATTGGGCCAAACCAGGAACAACTGCAGGTTTTAAAACACTTGAATCTTTTTGTCAGGAGAGGTTGAAATTTTTCTCAGCAGACAGAAATAATCCAAATAAAGCAGCTCTTAGTAACCTGTCTCCATGGATACATTTTGGTCAGATCTCAGTACAGAGGTGTATTTTGACTGTTAAGCAGTACAGAAGTAAATATAAGGAGAGTGTAGAGGCTTACATTGAGGAGGCTATAATTAGAAGAGAGTTGTCTGATAACTATTGTTATTATAACAAAAATTACGATTCTATTGAAGGGGCACATGACTGGGCTAAAACAACTTTAAAACTACACGAAAAGGATAAAAGAACATATGTTTATACAAGAGAACAGCTTGAGAAGGGGCAAAGTCATGATGATTTATGGAATGCTGCTCAGATACAGATGGTTGTGGAAGGAAAGATGCATGGCTTTCTTAGAATGTACTGGGCAAAGAAAATTTTAGAGTGGACATCAAACCCGACAGAGGCATTAGAAACTGCTATTTATCTGAATGATAGATATAGTTTAGACGGTAGAGATCCTAATGGCTATGTTGGTTGTATGTGGTCTATATGTGGCGTACATGACCAAGGATGGAGAGAAAGGGAAATCTTTGGCAAGATTCGTTACATGAATTACGCCGGATGTAGAAGAAAGTTTGAGGTTGCTGCATTTGTCAGGAAATATACCAAAACAAAATTGTAGAATTAAGTATGAAATGTACATATCTTTTGTTTTAGAAGATCTACCTCAAAATTCAAAAAAGTGGATCATGTGTACATATGCTGTTGACTTAATTTTGCCTCATATTTCATTAATGGGATGTCTTGGTTGTGATTGTATGGTAGTTTGATTTACAACTACCTGTGCAATCAATGCCTATCACCACTAAAGTTATGAGTTCTAATCCCCCTCATGGCGAGGTGTATTCCATACAATATTATGTGATAACGTTGATCAATTCTGGTTTCTTCCACCAATAAAACTGACCGCCAGGATATAACTGAAATATTGTTGATAGTGGCGTTAAACACCATAACTATAACCCCTGTTACTAATCAATATGAGTATGTATGATATGTATATATTTTTTTATTCTAATCTCAAAATTCACTATTTTAGCATTGACTTGAAGTGAATCATGAAATGTTATATTTTCATATGTTTTTGTCTTAGGATATTTCATTGTTATGTTGTTACTTGGTTATTAATAGGGGCCATTTTTAGTTGTAATTGTATGGTATTTGGATTTACAAGTACCTATGCATTCAGTGCCTATACCCACTAAAGTTGTTAGTTTGAATCCTACTCATGGAAAGATGTACTCGATACAACATTATGTGATAAAATTTGTCAGTGACAGGTCGGTGGTTTTCTCCAGGTACTACTCTGGTTTCACCAATAAAACTGACTGCCACGATGTAACTGAAATATTGATGAAAGTGGCGTTAAACACCACAACCACCACCACCTGGTATTAATGATTACTGTTTAAGTCATGGCACTGTTTAAAAGTCATGGTACTGTTTAAGTCCTGGTACTACTATTACCCACAAAAATGTGAATGTACTGCTTGAGGATAAATATCCATACAACAAAATATTGAAACTTCTGGGAGTTTACAAAAAAATGTAAATGTATAAGAAACTGAAAAACAAAAAAATACCACTGTCAGAACATTACCAAAATCAATGATCAAAATTGTAGAAAGACTTTAAAGAGGAAAAACGTGTCTAAATGATACAGTCATACAAGTGTATTCCAAACGTGTCTAAATGATACAGTCATACAAGTGTATTCCAAACGTGTCTAAATGCAAAGTTGATTGAAGACAGACTGATTTGTATACTGGTAGATATGTGAAGTTAACAATCAAAGATTAGGATTATGGTGTTTAACACCACTTTCAACAATATTTCAGTTATATCATGATGGTCAGTTTTATTGGTGGAGGACATTAGAATACTTTAAAAATCATCAACCTGCCCGAAGTCACTGACAAACTATATCACATAATGTATCGAGTACACCTCGCCCTGAGCGGGTTTCGAACTCGCAACTTTAGTGATGGGCACTGATTGGATATATGTAGTTGTAAATCCAATTACTATATGATCATAACCACAACGGCCCCAGTTAATAATCAAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00875	DNA_photolyase	DNA photolyase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006050	Domain	DNA photolyase, N-terminal	Interproscan
IPR008148	Family	DNA photolyase class 2	Interproscan
IPR014729	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR032673	Conserved_site	DNA photolyase class 2, conserved site	Interproscan
IPR036134	Homologous_superfamily	Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily	Interproscan
IPR036155	Homologous_superfamily	Cryptochrome/photolyase, N-terminal domain superfamily	Interproscan
IPR052219	Family	DNA Photolyase Class-2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10211	DEOXYRIBODIPYRIMIDINE PHOTOLYASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000719	Biological Process	photoreactive repair	Interproscan
GO:0003904	Molecular Function	deoxyribodipyrimidine photo-lyase activity	Interproscan
GO:0006281	Biological Process	DNA repair	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01669	phr, PHR1; deoxyribodipyrimidine photo-lyase	EC:4.1.99.3	DNA repair and recombination proteins	ko03400	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_38784-7.12 global RNA-seq network