Detailed information of Bpl_scaf_38338-11.24 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_38338-11.24DNA-DIRECTED RNA POLYMERASE IIBpl_scaf_3833811776311186146-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03874RNA_pol_Rpb4RNA polymerase Rpb4FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR005574FamilyRNA polymerase subunit Rpb4/RPC9Interproscan
IPR006590DomainRNA polymerase Rpb4/RPC9, coreInterproscan
IPR010997Homologous_superfamilyHRDC-like superfamilyInterproscan
IPR038324Homologous_superfamilyRpb4/RPC9 superfamilyInterproscan
IPR045222FamilyDNA-directed RNA polymerase II subunit Rpb4-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR21297DNA-DIRECTED RNA POLYMERASE IIInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0005665Cellular ComponentRNA polymerase II, core complexInterproscan
GO:0006352Biological ProcessDNA-templated transcription initiationInterproscan
GO:0006367Biological Processtranscription initiation at RNA polymerase II promoterInterproscan
GO:0030880Cellular ComponentRNA polymerase complexInterproscan
GO:0031369Molecular Functiontranslation initiation factor bindingInterproscan
GO:0034402Biological Processobsolete recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complexInterproscan
GO:0044237Biological Processobsolete cellular metabolic processInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03012RPB4, POLR2D; DNA-directed RNA polymerase II subunit RPB4-Purine metabolism ko00230PMID: 28812709
Pyrimidine metabolism ko00240PMID: 28812709
RNA polymerase ko03020PMID: 28812709
Huntington's disease ko05016PMID: 28812709
Epstein-Barr virus infection ko05169PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_38338-11.24 global RNA-seq network
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