Detailed information of Bpl_scaf_38287-1.10 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_38287-1.10NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATEDBpl_scaf_3828798696165295+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12765Cohesin_HEATHEAT repeat associated with sister chromatid cohesionRepeatInterproscan
PF12830Nipped-B_CSister chromatid cohesion C-terminusRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR024986DomainSister chromatid cohesion C-terminal domainInterproscan
IPR026003RepeatHEAT repeat associated with sister chromatid cohesion proteinInterproscan
IPR033031FamilyScc2/Nipped-B familyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR21704NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:0034087Biological Processestablishment of mitotic sister chromatid cohesionInterproscan
GO:0061780Biological Processobsolete mitotic cohesin loadingInterproscan
GO:0071169Biological Processestablishment of protein localization to chromatinInterproscan
GO:0090694Cellular ComponentScc2-Scc4 cohesin loading complexInterproscan
GO:1990414Biological Processreplication-born double-strand break repair via sister chromatid exchangeInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06672SCC2, NIPBL; cohesin loading factor subunit SCC2-Cell cycle - yeast ko04111PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_38287-1.10 global RNA-seq network
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